Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Usp1Q8BJQ2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Usp1Q8BJQ2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp1Q8BJQ2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Usp1Q8BJQ2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp1Q8BJQ2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Usp1Q8BJQ2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Usp1Q8BJQ2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Usp1Q8BJQ2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp1Q8BJQ2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Usp1Q8BJQ2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp1Q8BJQ2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp1Q8BJQ2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Usp1Q8BJQ2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp1Q8BJQ2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp1Q8BJQ2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.53■□□□□ 0.88
Usp1Q8BJQ2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.53■□□□□ 0.88
Usp1Q8BJQ2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Usp1Q8BJQ2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp1Q8BJQ2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp1Q8BJQ2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp1Q8BJQ2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Usp1Q8BJQ2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp1Q8BJQ2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Usp1Q8BJQ2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp1Q8BJQ2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.52■□□□□ 0.88
Usp1Q8BJQ2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Usp1Q8BJQ2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Usp1Q8BJQ2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Usp1Q8BJQ2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp1Q8BJQ2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Usp1Q8BJQ2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp1Q8BJQ2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp1Q8BJQ2 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.51■□□□□ 0.87
Usp1Q8BJQ2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp1Q8BJQ2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp1Q8BJQ2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Usp1Q8BJQ2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Usp1Q8BJQ2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp1Q8BJQ2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp1Q8BJQ2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Usp1Q8BJQ2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp1Q8BJQ2 Mir5133-201ENSMUST00000174955 77 ntBASIC20.5■□□□□ 0.87
Usp1Q8BJQ2 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.5■□□□□ 0.87
Usp1Q8BJQ2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp1Q8BJQ2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp1Q8BJQ2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Usp1Q8BJQ2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Usp1Q8BJQ2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Usp1Q8BJQ2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp1Q8BJQ2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp1Q8BJQ2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp1Q8BJQ2 Gm13146-201ENSMUST00000118508 780 ntBASIC20.49■□□□□ 0.87
Usp1Q8BJQ2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.49■□□□□ 0.87
Usp1Q8BJQ2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Usp1Q8BJQ2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Usp1Q8BJQ2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp1Q8BJQ2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Usp1Q8BJQ2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Usp1Q8BJQ2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Usp1Q8BJQ2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Usp1Q8BJQ2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp1Q8BJQ2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp1Q8BJQ2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.47■□□□□ 0.87
Usp1Q8BJQ2 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp1Q8BJQ2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp1Q8BJQ2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Usp1Q8BJQ2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp1Q8BJQ2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp1Q8BJQ2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Usp1Q8BJQ2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Usp1Q8BJQ2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Usp1Q8BJQ2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp1Q8BJQ2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp1Q8BJQ2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Usp1Q8BJQ2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms