Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trnp1Q80ZI1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trnp1Q80ZI1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trnp1Q80ZI1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trnp1Q80ZI1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trnp1Q80ZI1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Trnp1Q80ZI1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trnp1Q80ZI1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trnp1Q80ZI1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Trnp1Q80ZI1 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC22.09■■□□□ 1.13
Trnp1Q80ZI1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trnp1Q80ZI1 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trnp1Q80ZI1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
Trnp1Q80ZI1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trnp1Q80ZI1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trnp1Q80ZI1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.08■■□□□ 1.13
Trnp1Q80ZI1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Trnp1Q80ZI1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trnp1Q80ZI1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
Trnp1Q80ZI1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC22.08■■□□□ 1.13
Trnp1Q80ZI1 Gm29994-201ENSMUST00000195495 1193 ntBASIC22.08■■□□□ 1.13
Trnp1Q80ZI1 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Trnp1Q80ZI1 Arhgef33-211ENSMUST00000225658 473 ntBASIC22.08■■□□□ 1.13
Trnp1Q80ZI1 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Trnp1Q80ZI1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trnp1Q80ZI1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trnp1Q80ZI1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Trnp1Q80ZI1 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.07■■□□□ 1.12
Trnp1Q80ZI1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Trnp1Q80ZI1 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.07■■□□□ 1.12
Trnp1Q80ZI1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.07■■□□□ 1.12
Trnp1Q80ZI1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Trnp1Q80ZI1 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Trnp1Q80ZI1 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trnp1Q80ZI1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Trnp1Q80ZI1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trnp1Q80ZI1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.06■■□□□ 1.12
Trnp1Q80ZI1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Trnp1Q80ZI1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trnp1Q80ZI1 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC22.05■■□□□ 1.12
Trnp1Q80ZI1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trnp1Q80ZI1 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trnp1Q80ZI1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
Trnp1Q80ZI1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trnp1Q80ZI1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Trnp1Q80ZI1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trnp1Q80ZI1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trnp1Q80ZI1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trnp1Q80ZI1 Gm32051-202ENSMUST00000197905 2385 ntBASIC22.04■■□□□ 1.12
Trnp1Q80ZI1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trnp1Q80ZI1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trnp1Q80ZI1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Trnp1Q80ZI1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Trnp1Q80ZI1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trnp1Q80ZI1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trnp1Q80ZI1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trnp1Q80ZI1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trnp1Q80ZI1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trnp1Q80ZI1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trnp1Q80ZI1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Trnp1Q80ZI1 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.03■■□□□ 1.12
Trnp1Q80ZI1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC22.03■■□□□ 1.12
Trnp1Q80ZI1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC22.03■■□□□ 1.12
Trnp1Q80ZI1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trnp1Q80ZI1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trnp1Q80ZI1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trnp1Q80ZI1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trnp1Q80ZI1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trnp1Q80ZI1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
Trnp1Q80ZI1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trnp1Q80ZI1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Trnp1Q80ZI1 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trnp1Q80ZI1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trnp1Q80ZI1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trnp1Q80ZI1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trnp1Q80ZI1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trnp1Q80ZI1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Gm15043-201ENSMUST00000118843 1543 ntBASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Gm2559-201ENSMUST00000201323 363 ntBASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trnp1Q80ZI1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trnp1Q80ZI1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trnp1Q80ZI1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Trnp1Q80ZI1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Trnp1Q80ZI1 Gm715-201ENSMUST00000117865 831 ntBASIC22■■□□□ 1.11
Trnp1Q80ZI1 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trnp1Q80ZI1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC22■■□□□ 1.11
Trnp1Q80ZI1 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC22■■□□□ 1.11
Trnp1Q80ZI1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22■■□□□ 1.11
Trnp1Q80ZI1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trnp1Q80ZI1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trnp1Q80ZI1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms