Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bQ80YF6 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.36■□□□□ 0.21
Upk3bQ80YF6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.36■□□□□ 0.21
Upk3bQ80YF6 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Upk3bQ80YF6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bQ80YF6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Upk3bQ80YF6 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bQ80YF6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bQ80YF6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bQ80YF6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bQ80YF6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 AA386476-201ENSMUST00000098781 1665 ntBASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bQ80YF6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bQ80YF6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upk3bQ80YF6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Upk3bQ80YF6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upk3bQ80YF6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upk3bQ80YF6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bQ80YF6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Upk3bQ80YF6 Golph3-205ENSMUST00000228671 2842 ntBASIC16.32■□□□□ 0.2
Upk3bQ80YF6 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bQ80YF6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Upk3bQ80YF6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.32■□□□□ 0.2
Upk3bQ80YF6 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.32■□□□□ 0.2
Upk3bQ80YF6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.32■□□□□ 0.2
Upk3bQ80YF6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bQ80YF6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bQ80YF6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Upk3bQ80YF6 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bQ80YF6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Upk3bQ80YF6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms