Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Prpf40bQ80W14 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Prpf40bQ80W14 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC22.36■■□□□ 1.17
Prpf40bQ80W14 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Prpf40bQ80W14 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Prpf40bQ80W14 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Prpf40bQ80W14 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Prpf40bQ80W14 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Prpf40bQ80W14 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prpf40bQ80W14 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prpf40bQ80W14 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Prpf40bQ80W14 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prpf40bQ80W14 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prpf40bQ80W14 Ap3s1-204ENSMUST00000225520 957 ntBASIC22.35■■□□□ 1.17
Prpf40bQ80W14 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Prpf40bQ80W14 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prpf40bQ80W14 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prpf40bQ80W14 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prpf40bQ80W14 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Prpf40bQ80W14 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Gm8520-201ENSMUST00000186517 868 ntBASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Prpf40bQ80W14 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Prpf40bQ80W14 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Prpf40bQ80W14 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Prpf40bQ80W14 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Prpf40bQ80W14 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Prpf40bQ80W14 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Prpf40bQ80W14 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Prpf40bQ80W14 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.33■■□□□ 1.17
Prpf40bQ80W14 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Prpf40bQ80W14 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.33■■□□□ 1.17
Prpf40bQ80W14 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Prpf40bQ80W14 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.33■■□□□ 1.17
Prpf40bQ80W14 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Prpf40bQ80W14 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Prpf40bQ80W14 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.32■■□□□ 1.16
Prpf40bQ80W14 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC22.32■■□□□ 1.16
Prpf40bQ80W14 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Prpf40bQ80W14 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Prpf40bQ80W14 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Prpf40bQ80W14 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22.31■■□□□ 1.16
Prpf40bQ80W14 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Prpf40bQ80W14 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Prpf40bQ80W14 Gm12527-201ENSMUST00000117967 564 ntBASIC22.31■■□□□ 1.16
Prpf40bQ80W14 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.31■■□□□ 1.16
Prpf40bQ80W14 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.31■■□□□ 1.16
Prpf40bQ80W14 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Prpf40bQ80W14 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.31■■□□□ 1.16
Prpf40bQ80W14 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Prpf40bQ80W14 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.3■■□□□ 1.16
Prpf40bQ80W14 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Prpf40bQ80W14 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Prpf40bQ80W14 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Prpf40bQ80W14 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Prpf40bQ80W14 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC22.29■■□□□ 1.16
Prpf40bQ80W14 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.29■■□□□ 1.16
Prpf40bQ80W14 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Prpf40bQ80W14 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Prpf40bQ80W14 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Prpf40bQ80W14 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Prpf40bQ80W14 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Prpf40bQ80W14 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC22.28■■□□□ 1.16
Prpf40bQ80W14 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Prpf40bQ80W14 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Prpf40bQ80W14 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Prpf40bQ80W14 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Prpf40bQ80W14 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Prpf40bQ80W14 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Prpf40bQ80W14 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Prpf40bQ80W14 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Prpf40bQ80W14 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Prpf40bQ80W14 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.27■■□□□ 1.16
Prpf40bQ80W14 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms