Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 TPRG1LP1-201ENST00000598702 760 ntBASIC18.92■□□□□ 0.62
SSX8Q7RTT4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SSX8Q7RTT4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SSX8Q7RTT4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX8Q7RTT4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX8Q7RTT4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX8Q7RTT4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX8Q7RTT4 DUX4L2-201ENST00000561772 1275 ntBASIC18.91■□□□□ 0.62
SSX8Q7RTT4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.91■□□□□ 0.62
SSX8Q7RTT4 AL034346.1-201ENST00000568244 1277 ntBASIC18.91■□□□□ 0.62
SSX8Q7RTT4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.91■□□□□ 0.62
SSX8Q7RTT4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SSX8Q7RTT4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
SSX8Q7RTT4 DUX4L6-201ENST00000626483 1275 ntBASIC18.91■□□□□ 0.62
SSX8Q7RTT4 DUX4L1-201ENST00000627662 1275 ntBASIC18.91■□□□□ 0.62
SSX8Q7RTT4 DUX4L8-201ENST00000629013 1275 ntBASIC18.91■□□□□ 0.62
SSX8Q7RTT4 DUX4L3-201ENST00000630187 1275 ntBASIC18.91■□□□□ 0.62
SSX8Q7RTT4 DUX4L7-201ENST00000630678 1275 ntBASIC18.91■□□□□ 0.62
SSX8Q7RTT4 DUX4L5-201ENST00000630834 1275 ntBASIC18.91■□□□□ 0.62
SSX8Q7RTT4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SSX8Q7RTT4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.91■□□□□ 0.62
SSX8Q7RTT4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SSX8Q7RTT4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.9■□□□□ 0.62
SSX8Q7RTT4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SSX8Q7RTT4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.9■□□□□ 0.62
SSX8Q7RTT4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SSX8Q7RTT4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
SSX8Q7RTT4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SSX8Q7RTT4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SSX8Q7RTT4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 LINC01960-201ENST00000563759 1884 ntBASIC18.89■□□□□ 0.61
SSX8Q7RTT4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SSX8Q7RTT4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 KRT18P5-201ENST00000436075 1291 ntBASIC18.88■□□□□ 0.61
SSX8Q7RTT4 AC079089.2-201ENST00000531211 1277 ntBASIC18.88■□□□□ 0.61
SSX8Q7RTT4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SSX8Q7RTT4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX8Q7RTT4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX8Q7RTT4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX8Q7RTT4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX8Q7RTT4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SSX8Q7RTT4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.87■□□□□ 0.61
SSX8Q7RTT4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SSX8Q7RTT4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.87■□□□□ 0.61
SSX8Q7RTT4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SSX8Q7RTT4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.87■□□□□ 0.61
SSX8Q7RTT4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.87■□□□□ 0.61
SSX8Q7RTT4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 NTF6G-201ENST00000591094 616 ntBASIC18.86■□□□□ 0.61
SSX8Q7RTT4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SSX8Q7RTT4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSX8Q7RTT4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms