Protein–RNA interactions for Protein: Q6XAS3

Ssx9, MCG116991, isoform CRA_b, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx9Q6XAS3 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.26■□□□□ 0.67
Ssx9Q6XAS3 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssx9Q6XAS3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Ssx9Q6XAS3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Serp2-204ENSMUST00000228055 705 ntBASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ssx9Q6XAS3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssx9Q6XAS3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssx9Q6XAS3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx9Q6XAS3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx9Q6XAS3 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx9Q6XAS3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Ssx9Q6XAS3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx9Q6XAS3 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx9Q6XAS3 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx9Q6XAS3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssx9Q6XAS3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssx9Q6XAS3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssx9Q6XAS3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssx9Q6XAS3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.2■□□□□ 0.66
Ssx9Q6XAS3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssx9Q6XAS3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ssx9Q6XAS3 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx9Q6XAS3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx9Q6XAS3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.18■□□□□ 0.66
Ssx9Q6XAS3 Gm43137-201ENSMUST00000198052 594 ntBASIC19.18■□□□□ 0.66
Ssx9Q6XAS3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx9Q6XAS3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx9Q6XAS3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx9Q6XAS3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx9Q6XAS3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssx9Q6XAS3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms