Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.81■■□□□ 1.56
PPP4R3AQ6IN85 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PPP4R3AQ6IN85 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
PPP4R3AQ6IN85 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.8■■□□□ 1.56
PPP4R3AQ6IN85 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.8■■□□□ 1.56
PPP4R3AQ6IN85 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
PPP4R3AQ6IN85 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
PPP4R3AQ6IN85 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 AC010141.3-201ENST00000456659 717 ntBASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 IGHV3-19-201ENST00000521488 291 ntBASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PPP4R3AQ6IN85 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 AC087239.1-201ENST00000622671 572 ntBASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
PPP4R3AQ6IN85 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 AC127496.7-201ENST00000625110 1798 ntBASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PPP4R3AQ6IN85 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PPP4R3AQ6IN85 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.75■■□□□ 1.55
PPP4R3AQ6IN85 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R3AQ6IN85 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
PPP4R3AQ6IN85 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R3AQ6IN85 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R3AQ6IN85 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
PPP4R3AQ6IN85 EBPL-204ENST00000378272 766 ntTSL 3 BASIC24.75■■□□□ 1.55
PPP4R3AQ6IN85 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.75■■□□□ 1.55
PPP4R3AQ6IN85 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.75■■□□□ 1.55
PPP4R3AQ6IN85 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PPP4R3AQ6IN85 AC137767.1-201ENST00000602918 1920 ntBASIC24.74■■□□□ 1.55
PPP4R3AQ6IN85 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R3AQ6IN85 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R3AQ6IN85 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.74■■□□□ 1.55
PPP4R3AQ6IN85 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R3AQ6IN85 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R3AQ6IN85 OXCT2P1-201ENST00000447263 1535 ntBASIC24.74■■□□□ 1.55
PPP4R3AQ6IN85 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R3AQ6IN85 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R3AQ6IN85 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PPP4R3AQ6IN85 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms