Protein–RNA interactions for Protein: Q61467

Zic4, Zinc finger protein ZIC 4, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zic4Q61467 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.76■□□□□ 0.11
Zic4Q61467 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zic4Q61467 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Zic4Q61467 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Zic4Q61467 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Zic4Q61467 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zic4Q61467 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Zic4Q61467 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.76■□□□□ 0.11
Zic4Q61467 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Zic4Q61467 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Zic4Q61467 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zic4Q61467 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Zic4Q61467 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Zic4Q61467 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zic4Q61467 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Zic4Q61467 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zic4Q61467 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zic4Q61467 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zic4Q61467 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Zic4Q61467 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.74■□□□□ 0.11
Zic4Q61467 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Zic4Q61467 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.73■□□□□ 0.11
Zic4Q61467 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Zic4Q61467 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.73■□□□□ 0.11
Zic4Q61467 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.73■□□□□ 0.11
Zic4Q61467 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.73■□□□□ 0.11
Zic4Q61467 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 AA386476-201ENSMUST00000098781 1665 ntBASIC15.73■□□□□ 0.11
Zic4Q61467 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Zic4Q61467 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zic4Q61467 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Zic4Q61467 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.72■□□□□ 0.11
Zic4Q61467 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zic4Q61467 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zic4Q61467 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zic4Q61467 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.72■□□□□ 0.11
Zic4Q61467 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.72■□□□□ 0.11
Zic4Q61467 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC15.72■□□□□ 0.11
Zic4Q61467 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zic4Q61467 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Zic4Q61467 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zic4Q61467 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Zic4Q61467 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Zic4Q61467 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zic4Q61467 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Zic4Q61467 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zic4Q61467 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Zic4Q61467 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zic4Q61467 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Zic4Q61467 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.71■□□□□ 0.11
Zic4Q61467 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zic4Q61467 Gm45444-201ENSMUST00000211394 898 ntBASIC15.71■□□□□ 0.11
Zic4Q61467 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.71■□□□□ 0.11
Zic4Q61467 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zic4Q61467 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zic4Q61467 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zic4Q61467 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Zic4Q61467 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Zic4Q61467 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.1
Zic4Q61467 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Zic4Q61467 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Zic4Q61467 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zic4Q61467 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zic4Q61467 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zic4Q61467 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zic4Q61467 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Zic4Q61467 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Zic4Q61467 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.7■□□□□ 0.1
Zic4Q61467 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.7■□□□□ 0.1
Zic4Q61467 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.7■□□□□ 0.1
Zic4Q61467 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Zic4Q61467 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.69■□□□□ 0.1
Zic4Q61467 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zic4Q61467 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Zic4Q61467 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms