Protein–RNA interactions for Protein: Q60771

Cldn11, Claudin-11, mousemouse

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn11Q60771 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn11Q60771 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Cldn11Q60771 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn11Q60771 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn11Q60771 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn11Q60771 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn11Q60771 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
Cldn11Q60771 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Cldn11Q60771 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn11Q60771 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.1■□□□□ 0.81
Cldn11Q60771 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn11Q60771 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn11Q60771 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn11Q60771 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn11Q60771 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn11Q60771 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn11Q60771 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn11Q60771 Gm7291-201ENSMUST00000199147 382 ntBASIC20.09■□□□□ 0.81
Cldn11Q60771 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.09■□□□□ 0.81
Cldn11Q60771 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.09■□□□□ 0.81
Cldn11Q60771 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn11Q60771 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn11Q60771 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.09■□□□□ 0.81
Cldn11Q60771 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn11Q60771 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn11Q60771 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn11Q60771 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn11Q60771 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn11Q60771 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn11Q60771 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn11Q60771 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.08■□□□□ 0.81
Cldn11Q60771 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn11Q60771 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Cldn11Q60771 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn11Q60771 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.08■□□□□ 0.81
Cldn11Q60771 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn11Q60771 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn11Q60771 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn11Q60771 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn11Q60771 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Cldn11Q60771 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cldn11Q60771 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn11Q60771 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn11Q60771 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn11Q60771 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.07■□□□□ 0.8
Cldn11Q60771 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.07■□□□□ 0.8
Cldn11Q60771 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn11Q60771 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn11Q60771 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn11Q60771 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.07■□□□□ 0.8
Cldn11Q60771 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn11Q60771 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn11Q60771 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cldn11Q60771 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn11Q60771 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn11Q60771 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn11Q60771 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn11Q60771 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.06■□□□□ 0.8
Cldn11Q60771 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn11Q60771 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn11Q60771 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn11Q60771 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn11Q60771 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.06■□□□□ 0.8
Cldn11Q60771 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn11Q60771 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.05■□□□□ 0.8
Cldn11Q60771 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn11Q60771 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn11Q60771 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.05■□□□□ 0.8
Cldn11Q60771 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn11Q60771 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Cldn11Q60771 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cldn11Q60771 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn11Q60771 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn11Q60771 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn11Q60771 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.04■□□□□ 0.8
Cldn11Q60771 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.04■□□□□ 0.8
Cldn11Q60771 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn11Q60771 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn11Q60771 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn11Q60771 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn11Q60771 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn11Q60771 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn11Q60771 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn11Q60771 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cldn11Q60771 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cldn11Q60771 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cldn11Q60771 Gm38205-201ENSMUST00000192243 258 ntBASIC20.03■□□□□ 0.8
Cldn11Q60771 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn11Q60771 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn11Q60771 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.03■□□□□ 0.8
Cldn11Q60771 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.03■□□□□ 0.8
Cldn11Q60771 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn11Q60771 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cldn11Q60771 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn11Q60771 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Cldn11Q60771 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.02■□□□□ 0.8
Cldn11Q60771 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn11Q60771 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn11Q60771 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn11Q60771 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms