Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim80Q3V061 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim80Q3V061 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim80Q3V061 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim80Q3V061 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim80Q3V061 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim80Q3V061 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim80Q3V061 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trim80Q3V061 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim80Q3V061 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim80Q3V061 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trim80Q3V061 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim80Q3V061 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Trim80Q3V061 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim80Q3V061 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trim80Q3V061 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim80Q3V061 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim80Q3V061 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Trim80Q3V061 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trim80Q3V061 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim80Q3V061 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim80Q3V061 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim80Q3V061 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim80Q3V061 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim80Q3V061 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim80Q3V061 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trim80Q3V061 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim80Q3V061 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.85■□□□□ 0.77
Trim80Q3V061 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim80Q3V061 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim80Q3V061 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim80Q3V061 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.84■□□□□ 0.77
Trim80Q3V061 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim80Q3V061 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.84■□□□□ 0.77
Trim80Q3V061 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim80Q3V061 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim80Q3V061 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim80Q3V061 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim80Q3V061 Gm27454-201ENSMUST00000185090 204 ntBASIC19.83■□□□□ 0.77
Trim80Q3V061 Golgb1-201ENSMUST00000023534 498 ntBASIC19.83■□□□□ 0.77
Trim80Q3V061 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim80Q3V061 Rarb-207ENSMUST00000225921 2756 ntBASIC19.82■□□□□ 0.76
Trim80Q3V061 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim80Q3V061 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.82■□□□□ 0.76
Trim80Q3V061 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim80Q3V061 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim80Q3V061 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim80Q3V061 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim80Q3V061 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim80Q3V061 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trim80Q3V061 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Trim80Q3V061 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.81■□□□□ 0.76
Trim80Q3V061 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim80Q3V061 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim80Q3V061 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
Trim80Q3V061 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim80Q3V061 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim80Q3V061 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim80Q3V061 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim80Q3V061 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.81■□□□□ 0.76
Trim80Q3V061 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim80Q3V061 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Trim80Q3V061 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim80Q3V061 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim80Q3V061 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim80Q3V061 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.8■□□□□ 0.76
Trim80Q3V061 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.8■□□□□ 0.76
Trim80Q3V061 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim80Q3V061 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim80Q3V061 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim80Q3V061 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim80Q3V061 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim80Q3V061 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim80Q3V061 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim80Q3V061 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim80Q3V061 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim80Q3V061 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Trim80Q3V061 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Trim80Q3V061 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim80Q3V061 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim80Q3V061 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim80Q3V061 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim80Q3V061 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim80Q3V061 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim80Q3V061 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim80Q3V061 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms