Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.57■□□□□ 0.72
Fam196aQ3USH1 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Fam196aQ3USH1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Fam196aQ3USH1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fam196aQ3USH1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Fam196aQ3USH1 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fam196aQ3USH1 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fam196aQ3USH1 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.55■□□□□ 0.72
Fam196aQ3USH1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fam196aQ3USH1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Fam196aQ3USH1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fam196aQ3USH1 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.55■□□□□ 0.72
Fam196aQ3USH1 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fam196aQ3USH1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fam196aQ3USH1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Fam196aQ3USH1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Fam196aQ3USH1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fam196aQ3USH1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Fam196aQ3USH1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fam196aQ3USH1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Fam196aQ3USH1 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.54■□□□□ 0.72
Fam196aQ3USH1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fam196aQ3USH1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fam196aQ3USH1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.54■□□□□ 0.72
Fam196aQ3USH1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Fam196aQ3USH1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fam196aQ3USH1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Fam196aQ3USH1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.53■□□□□ 0.72
Fam196aQ3USH1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam196aQ3USH1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam196aQ3USH1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam196aQ3USH1 Gm18666-201ENSMUST00000190039 958 ntBASIC19.53■□□□□ 0.72
Fam196aQ3USH1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam196aQ3USH1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.53■□□□□ 0.72
Fam196aQ3USH1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam196aQ3USH1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam196aQ3USH1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam196aQ3USH1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam196aQ3USH1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.52■□□□□ 0.72
Fam196aQ3USH1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Fam196aQ3USH1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.51■□□□□ 0.71
Fam196aQ3USH1 Dio3-201ENSMUST00000097228 1449 ntBASIC19.51■□□□□ 0.71
Fam196aQ3USH1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam196aQ3USH1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam196aQ3USH1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam196aQ3USH1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.51■□□□□ 0.71
Fam196aQ3USH1 Gm10698-201ENSMUST00000182663 604 ntBASIC19.51■□□□□ 0.71
Fam196aQ3USH1 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam196aQ3USH1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Fam196aQ3USH1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam196aQ3USH1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam196aQ3USH1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam196aQ3USH1 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam196aQ3USH1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam196aQ3USH1 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam196aQ3USH1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.49■□□□□ 0.71
Fam196aQ3USH1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Fam196aQ3USH1 Mir1199-201ENSMUST00000117015 119 ntBASIC19.49■□□□□ 0.71
Fam196aQ3USH1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Fam196aQ3USH1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Fam196aQ3USH1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Fam196aQ3USH1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam196aQ3USH1 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms