Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smn1P97801 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smn1P97801 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.57■□□□□ 0.24
Smn1P97801 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Smn1P97801 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smn1P97801 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.56■□□□□ 0.24
Smn1P97801 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Smn1P97801 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Smn1P97801 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.56■□□□□ 0.24
Smn1P97801 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Smn1P97801 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.56■□□□□ 0.24
Smn1P97801 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Smn1P97801 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Smn1P97801 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Smn1P97801 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smn1P97801 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Smn1P97801 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smn1P97801 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smn1P97801 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smn1P97801 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.55■□□□□ 0.24
Smn1P97801 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.55■□□□□ 0.24
Smn1P97801 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smn1P97801 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Smn1P97801 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Smn1P97801 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Smn1P97801 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.54■□□□□ 0.24
Smn1P97801 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Smn1P97801 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.54■□□□□ 0.24
Smn1P97801 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Smn1P97801 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smn1P97801 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smn1P97801 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smn1P97801 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Smn1P97801 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smn1P97801 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.53■□□□□ 0.24
Smn1P97801 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.53■□□□□ 0.24
Smn1P97801 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smn1P97801 Gm9870-201ENSMUST00000063874 645 ntBASIC16.53■□□□□ 0.24
Smn1P97801 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smn1P97801 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Smn1P97801 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Smn1P97801 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Smn1P97801 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smn1P97801 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smn1P97801 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Smn1P97801 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC16.52■□□□□ 0.24
Smn1P97801 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smn1P97801 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Smn1P97801 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smn1P97801 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Smn1P97801 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smn1P97801 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smn1P97801 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smn1P97801 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smn1P97801 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Smn1P97801 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.52■□□□□ 0.23
Smn1P97801 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Smn1P97801 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smn1P97801 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smn1P97801 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Smn1P97801 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smn1P97801 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smn1P97801 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smn1P97801 Etf1-202ENSMUST00000180351 108 ntBASIC16.51■□□□□ 0.23
Smn1P97801 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.51■□□□□ 0.23
Smn1P97801 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.51■□□□□ 0.23
Smn1P97801 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smn1P97801 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smn1P97801 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smn1P97801 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smn1P97801 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smn1P97801 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
Smn1P97801 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Smn1P97801 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Smn1P97801 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms