Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43cP86449 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43cP86449 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43cP86449 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43cP86449 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.13■□□□□ 0.97
Trim43cP86449 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.13■□□□□ 0.97
Trim43cP86449 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Trim43cP86449 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43cP86449 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43cP86449 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43cP86449 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43cP86449 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43cP86449 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43cP86449 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.12■□□□□ 0.97
Trim43cP86449 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.12■□□□□ 0.97
Trim43cP86449 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43cP86449 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Trim43cP86449 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43cP86449 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43cP86449 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim43cP86449 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.12■□□□□ 0.97
Trim43cP86449 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Trim43cP86449 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.11■□□□□ 0.97
Trim43cP86449 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Trim43cP86449 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.11■□□□□ 0.97
Trim43cP86449 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Trim43cP86449 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Trim43cP86449 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trim43cP86449 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
Trim43cP86449 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43cP86449 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43cP86449 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Trim43cP86449 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Trim43cP86449 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.1■□□□□ 0.97
Trim43cP86449 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43cP86449 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43cP86449 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43cP86449 Iqck-206ENSMUST00000208658 2891 ntBASIC21.1■□□□□ 0.97
Trim43cP86449 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trim43cP86449 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43cP86449 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43cP86449 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43cP86449 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43cP86449 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43cP86449 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43cP86449 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43cP86449 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Trim43cP86449 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Trim43cP86449 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43cP86449 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Trim43cP86449 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.08■□□□□ 0.97
Trim43cP86449 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43cP86449 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Trim43cP86449 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43cP86449 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Trim43cP86449 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Trim43cP86449 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Trim43cP86449 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43cP86449 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43cP86449 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43cP86449 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.07■□□□□ 0.96
Trim43cP86449 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43cP86449 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43cP86449 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.07■□□□□ 0.96
Trim43cP86449 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43cP86449 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43cP86449 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43cP86449 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trim43cP86449 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trim43cP86449 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43cP86449 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Trim43cP86449 Gm11421-201ENSMUST00000122124 294 ntBASIC21.06■□□□□ 0.96
Trim43cP86449 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.06■□□□□ 0.96
Trim43cP86449 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.06■□□□□ 0.96
Trim43cP86449 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trim43cP86449 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Trim43cP86449 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Trim43cP86449 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Trim43cP86449 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
Trim43cP86449 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Trim43cP86449 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43cP86449 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Trim43cP86449 Gm26833-201ENSMUST00000180899 440 ntBASIC21.05■□□□□ 0.96
Trim43cP86449 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.05■□□□□ 0.96
Trim43cP86449 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.05■□□□□ 0.96
Trim43cP86449 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.05■□□□□ 0.96
Trim43cP86449 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms