Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Hmga2P52927 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmga2P52927 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Hmga2P52927 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Hmga2P52927 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.49■□□□□ 0.23
Hmga2P52927 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Hmga2P52927 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Hmga2P52927 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Hmga2P52927 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.48■□□□□ 0.23
Hmga2P52927 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Hmga2P52927 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.47■□□□□ 0.23
Hmga2P52927 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmga2P52927 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmga2P52927 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmga2P52927 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hmga2P52927 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmga2P52927 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmga2P52927 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Hmga2P52927 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmga2P52927 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Hmga2P52927 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmga2P52927 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.46■□□□□ 0.23
Hmga2P52927 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.46■□□□□ 0.23
Hmga2P52927 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hmga2P52927 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.46■□□□□ 0.23
Hmga2P52927 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmga2P52927 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmga2P52927 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.46■□□□□ 0.23
Hmga2P52927 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Hmga2P52927 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmga2P52927 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.46■□□□□ 0.23
Hmga2P52927 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmga2P52927 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmga2P52927 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmga2P52927 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Hmga2P52927 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hmga2P52927 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Hmga2P52927 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.45■□□□□ 0.22
Hmga2P52927 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmga2P52927 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.45■□□□□ 0.22
Hmga2P52927 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmga2P52927 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Hmga2P52927 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmga2P52927 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmga2P52927 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmga2P52927 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmga2P52927 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hmga2P52927 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.45■□□□□ 0.22
Hmga2P52927 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmga2P52927 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmga2P52927 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmga2P52927 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.45■□□□□ 0.22
Hmga2P52927 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hmga2P52927 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.44■□□□□ 0.22
Hmga2P52927 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Hmga2P52927 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.44■□□□□ 0.22
Hmga2P52927 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hmga2P52927 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.44■□□□□ 0.22
Hmga2P52927 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.44■□□□□ 0.22
Hmga2P52927 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Hmga2P52927 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hmga2P52927 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hmga2P52927 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hmga2P52927 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.43■□□□□ 0.22
Hmga2P52927 Etf1-202ENSMUST00000180351 108 ntBASIC16.43■□□□□ 0.22
Hmga2P52927 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Hmga2P52927 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms