Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rfx3P48381 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx3P48381 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rfx3P48381 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx3P48381 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx3P48381 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx3P48381 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Rfx3P48381 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx3P48381 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx3P48381 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rfx3P48381 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx3P48381 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rfx3P48381 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rfx3P48381 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Rfx3P48381 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx3P48381 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx3P48381 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx3P48381 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx3P48381 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx3P48381 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx3P48381 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rfx3P48381 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx3P48381 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx3P48381 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx3P48381 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx3P48381 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx3P48381 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.42■□□□□ 0.38
Rfx3P48381 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.42■□□□□ 0.38
Rfx3P48381 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx3P48381 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx3P48381 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.42■□□□□ 0.38
Rfx3P48381 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rfx3P48381 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rfx3P48381 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx3P48381 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx3P48381 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx3P48381 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx3P48381 Golph3-205ENSMUST00000228671 2842 ntBASIC17.41■□□□□ 0.38
Rfx3P48381 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx3P48381 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx3P48381 Gm12922-201ENSMUST00000120626 809 ntBASIC17.41■□□□□ 0.38
Rfx3P48381 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.41■□□□□ 0.38
Rfx3P48381 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.41■□□□□ 0.38
Rfx3P48381 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx3P48381 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx3P48381 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx3P48381 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rfx3P48381 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx3P48381 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfx3P48381 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx3P48381 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx3P48381 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx3P48381 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.4■□□□□ 0.38
Rfx3P48381 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx3P48381 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rfx3P48381 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx3P48381 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.4■□□□□ 0.38
Rfx3P48381 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rfx3P48381 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rfx3P48381 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.39■□□□□ 0.38
Rfx3P48381 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfx3P48381 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx3P48381 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.39■□□□□ 0.37
Rfx3P48381 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.39■□□□□ 0.37
Rfx3P48381 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx3P48381 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx3P48381 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx3P48381 Golgb1-201ENSMUST00000023534 498 ntBASIC17.39■□□□□ 0.37
Rfx3P48381 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx3P48381 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx3P48381 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx3P48381 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rfx3P48381 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.39■□□□□ 0.37
Rfx3P48381 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rfx3P48381 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx3P48381 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rfx3P48381 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx3P48381 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx3P48381 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx3P48381 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rfx3P48381 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rfx3P48381 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rfx3P48381 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rfx3P48381 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.37■□□□□ 0.37
Rfx3P48381 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rfx3P48381 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx3P48381 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Rfx3P48381 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Rfx3P48381 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms