Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Xcl1P47993 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC12.73□□□□□ -0.37
Xcl1P47993 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Xcl1P47993 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Xcl1P47993 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Xcl1P47993 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Xcl1P47993 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Xcl1P47993 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Xcl1P47993 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.72□□□□□ -0.37
Xcl1P47993 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Xcl1P47993 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Xcl1P47993 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Xcl1P47993 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Xcl1P47993 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC12.72□□□□□ -0.37
Xcl1P47993 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Xcl1P47993 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Xcl1P47993 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Xcl1P47993 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Xcl1P47993 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Xcl1P47993 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC12.72□□□□□ -0.37
Xcl1P47993 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Xcl1P47993 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Xcl1P47993 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.71□□□□□ -0.37
Xcl1P47993 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Xcl1P47993 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Xcl1P47993 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Xcl1P47993 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Xcl1P47993 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Xcl1P47993 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Xcl1P47993 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Xcl1P47993 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Xcl1P47993 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Xcl1P47993 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Xcl1P47993 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Xcl1P47993 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Xcl1P47993 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Xcl1P47993 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Xcl1P47993 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Xcl1P47993 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Xcl1P47993 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Xcl1P47993 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.7□□□□□ -0.38
Xcl1P47993 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Xcl1P47993 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Xcl1P47993 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Xcl1P47993 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Xcl1P47993 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Xcl1P47993 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Xcl1P47993 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Xcl1P47993 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.69□□□□□ -0.38
Xcl1P47993 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Xcl1P47993 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Xcl1P47993 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Xcl1P47993 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Xcl1P47993 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Xcl1P47993 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Xcl1P47993 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Xcl1P47993 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Xcl1P47993 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Xcl1P47993 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Xcl1P47993 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Xcl1P47993 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Xcl1P47993 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Xcl1P47993 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Xcl1P47993 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Xcl1P47993 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Xcl1P47993 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Xcl1P47993 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Xcl1P47993 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Xcl1P47993 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Xcl1P47993 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Xcl1P47993 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC12.67□□□□□ -0.38
Xcl1P47993 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms