Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox5P35710 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox5P35710 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox5P35710 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox5P35710 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox5P35710 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox5P35710 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sox5P35710 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Sox5P35710 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.16■□□□□ 0.98
Sox5P35710 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Sox5P35710 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox5P35710 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox5P35710 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sox5P35710 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox5P35710 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sox5P35710 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.15■□□□□ 0.98
Sox5P35710 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.15■□□□□ 0.98
Sox5P35710 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox5P35710 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox5P35710 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox5P35710 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox5P35710 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Sox5P35710 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Sox5P35710 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.14■□□□□ 0.97
Sox5P35710 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.14■□□□□ 0.97
Sox5P35710 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Sox5P35710 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox5P35710 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sox5P35710 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox5P35710 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Sox5P35710 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sox5P35710 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Sox5P35710 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox5P35710 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Sox5P35710 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox5P35710 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.13■□□□□ 0.97
Sox5P35710 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Sox5P35710 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox5P35710 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox5P35710 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox5P35710 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Sox5P35710 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox5P35710 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Sox5P35710 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sox5P35710 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sox5P35710 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Sox5P35710 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sox5P35710 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.11■□□□□ 0.97
Sox5P35710 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.11■□□□□ 0.97
Sox5P35710 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox5P35710 BC021767-201ENSMUST00000126387 1716 ntBASIC21.11■□□□□ 0.97
Sox5P35710 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox5P35710 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
Sox5P35710 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox5P35710 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox5P35710 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox5P35710 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sox5P35710 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox5P35710 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sox5P35710 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.1■□□□□ 0.97
Sox5P35710 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox5P35710 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
Sox5P35710 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sox5P35710 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox5P35710 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox5P35710 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox5P35710 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
Sox5P35710 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sox5P35710 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox5P35710 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sox5P35710 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox5P35710 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sox5P35710 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox5P35710 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox5P35710 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox5P35710 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Sox5P35710 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox5P35710 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox5P35710 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Sox5P35710 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.08■□□□□ 0.97
Sox5P35710 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox5P35710 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.08■□□□□ 0.96
Sox5P35710 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sox5P35710 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Sox5P35710 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sox5P35710 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.08■□□□□ 0.96
Sox5P35710 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox5P35710 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox5P35710 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms