Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hbb-b1P02088 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Hbb-b1P02088 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hbb-b1P02088 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hbb-b1P02088 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hbb-b1P02088 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hbb-b1P02088 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Hbb-b1P02088 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hbb-b1P02088 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hbb-b1P02088 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hbb-b1P02088 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC13.71□□□□□ -0.21
Hbb-b1P02088 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hbb-b1P02088 Nsd1-206ENSMUST00000224918 1001 ntBASIC13.71□□□□□ -0.21
Hbb-b1P02088 AC154454.1-201ENSMUST00000225253 216 ntBASIC13.71□□□□□ -0.21
Hbb-b1P02088 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hbb-b1P02088 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hbb-b1P02088 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hbb-b1P02088 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.69□□□□□ -0.22
Hbb-b1P02088 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Gm44428-201ENSMUST00000204474 874 ntBASIC13.69□□□□□ -0.22
Hbb-b1P02088 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.69□□□□□ -0.22
Hbb-b1P02088 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hbb-b1P02088 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hbb-b1P02088 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC13.68□□□□□ -0.22
Hbb-b1P02088 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hbb-b1P02088 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hbb-b1P02088 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hbb-b1P02088 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hbb-b1P02088 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hbb-b1P02088 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hbb-b1P02088 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hbb-b1P02088 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hbb-b1P02088 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.67□□□□□ -0.22
Hbb-b1P02088 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Gm42809-201ENSMUST00000198429 1138 ntBASIC13.67□□□□□ -0.22
Hbb-b1P02088 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hbb-b1P02088 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hbb-b1P02088 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms