Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igh-VJ558P01758 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igh-VJ558P01758 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.8■□□□□ 0.28
Igh-VJ558P01758 Mir7075-201ENSMUST00000184187 82 ntBASIC16.8■□□□□ 0.28
Igh-VJ558P01758 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Igh-VJ558P01758 Gm10571-201ENSMUST00000097869 1638 ntBASIC16.8■□□□□ 0.28
Igh-VJ558P01758 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.8■□□□□ 0.28
Igh-VJ558P01758 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igh-VJ558P01758 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.79■□□□□ 0.28
Igh-VJ558P01758 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Igh-VJ558P01758 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Igh-VJ558P01758 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igh-VJ558P01758 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Igh-VJ558P01758 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igh-VJ558P01758 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Igh-VJ558P01758 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Igh-VJ558P01758 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Igh-VJ558P01758 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Igh-VJ558P01758 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Igh-VJ558P01758 Gm12821-201ENSMUST00000120022 600 ntBASIC16.77■□□□□ 0.28
Igh-VJ558P01758 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Igh-VJ558P01758 Gm27454-201ENSMUST00000185090 204 ntBASIC16.77■□□□□ 0.28
Igh-VJ558P01758 Gm43173-201ENSMUST00000202246 593 ntBASIC16.77■□□□□ 0.28
Igh-VJ558P01758 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Igh-VJ558P01758 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Igh-VJ558P01758 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igh-VJ558P01758 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igh-VJ558P01758 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Igh-VJ558P01758 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igh-VJ558P01758 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.76■□□□□ 0.27
Igh-VJ558P01758 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Igh-VJ558P01758 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igh-VJ558P01758 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igh-VJ558P01758 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.76■□□□□ 0.27
Igh-VJ558P01758 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igh-VJ558P01758 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igh-VJ558P01758 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Smad6-203ENSMUST00000179458 273 ntBASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Igh-VJ558P01758 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igh-VJ558P01758 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Igh-VJ558P01758 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms