Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Becn1O88597 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Becn1O88597 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Becn1O88597 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Becn1O88597 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Becn1O88597 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.08■■□□□ 1.13
Becn1O88597 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Becn1O88597 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Becn1O88597 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Becn1O88597 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.12
Becn1O88597 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Becn1O88597 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Becn1O88597 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC22.07■■□□□ 1.12
Becn1O88597 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC22.07■■□□□ 1.12
Becn1O88597 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Becn1O88597 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Becn1O88597 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.07■■□□□ 1.12
Becn1O88597 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Becn1O88597 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Becn1O88597 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Becn1O88597 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.07■■□□□ 1.12
Becn1O88597 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
Becn1O88597 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Becn1O88597 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Becn1O88597 Gm15820-201ENSMUST00000201566 728 ntBASIC22.06■■□□□ 1.12
Becn1O88597 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Becn1O88597 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Becn1O88597 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Becn1O88597 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Becn1O88597 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
Becn1O88597 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Becn1O88597 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Becn1O88597 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Becn1O88597 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Becn1O88597 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Becn1O88597 Gm44832-201ENSMUST00000208849 2303 ntBASIC22.05■■□□□ 1.12
Becn1O88597 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.05■■□□□ 1.12
Becn1O88597 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Becn1O88597 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.05■■□□□ 1.12
Becn1O88597 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.05■■□□□ 1.12
Becn1O88597 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Becn1O88597 Gm6627-201ENSMUST00000218299 2386 ntBASIC22.05■■□□□ 1.12
Becn1O88597 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Becn1O88597 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Becn1O88597 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Becn1O88597 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Becn1O88597 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Becn1O88597 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Becn1O88597 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Becn1O88597 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Becn1O88597 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Becn1O88597 Gm10232-201ENSMUST00000089221 720 ntBASIC22.04■■□□□ 1.12
Becn1O88597 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC22.04■■□□□ 1.12
Becn1O88597 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Becn1O88597 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC22.03■■□□□ 1.12
Becn1O88597 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Becn1O88597 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Becn1O88597 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Becn1O88597 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Becn1O88597 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Becn1O88597 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Becn1O88597 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Becn1O88597 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Becn1O88597 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Becn1O88597 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Becn1O88597 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Becn1O88597 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Becn1O88597 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Becn1O88597 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Becn1O88597 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Becn1O88597 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Becn1O88597 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Becn1O88597 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.02■■□□□ 1.12
Becn1O88597 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
Becn1O88597 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Becn1O88597 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Becn1O88597 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Becn1O88597 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Becn1O88597 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Becn1O88597 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Becn1O88597 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Becn1O88597 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Becn1O88597 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Becn1O88597 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Becn1O88597 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC22.01■■□□□ 1.11
Becn1O88597 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Becn1O88597 Gm5953-201ENSMUST00000220644 2616 ntBASIC22■■□□□ 1.11
Becn1O88597 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Becn1O88597 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Becn1O88597 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Becn1O88597 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22■■□□□ 1.11
Becn1O88597 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Becn1O88597 Gm18755-201ENSMUST00000218030 1099 ntBASIC22■■□□□ 1.11
Becn1O88597 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Becn1O88597 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Becn1O88597 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Becn1O88597 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
Becn1O88597 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Becn1O88597 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
Becn1O88597 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms