Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Per1O35973 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Per1O35973 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Per1O35973 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Per1O35973 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Per1O35973 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Per1O35973 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Per1O35973 Gm27405-201ENSMUST00000184201 112 ntBASIC21.16■□□□□ 0.98
Per1O35973 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC21.16■□□□□ 0.98
Per1O35973 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.16■□□□□ 0.98
Per1O35973 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Per1O35973 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.16■□□□□ 0.98
Per1O35973 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.16■□□□□ 0.98
Per1O35973 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Per1O35973 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Per1O35973 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Per1O35973 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Per1O35973 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Per1O35973 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Per1O35973 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Per1O35973 Gm38205-201ENSMUST00000192243 258 ntBASIC21.15■□□□□ 0.98
Per1O35973 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Per1O35973 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Per1O35973 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Per1O35973 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Per1O35973 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Per1O35973 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Per1O35973 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Per1O35973 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Per1O35973 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.14■□□□□ 0.97
Per1O35973 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Per1O35973 Gm42569-201ENSMUST00000200539 472 ntBASIC21.14■□□□□ 0.97
Per1O35973 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.14■□□□□ 0.97
Per1O35973 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Per1O35973 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Per1O35973 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.14■□□□□ 0.97
Per1O35973 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Per1O35973 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Per1O35973 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Per1O35973 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Per1O35973 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per1O35973 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Per1O35973 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per1O35973 Gm7860-201ENSMUST00000121190 879 ntBASIC21.13■□□□□ 0.97
Per1O35973 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Per1O35973 Gm7291-201ENSMUST00000199147 382 ntBASIC21.13■□□□□ 0.97
Per1O35973 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.13■□□□□ 0.97
Per1O35973 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Per1O35973 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per1O35973 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Per1O35973 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per1O35973 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Per1O35973 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per1O35973 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Per1O35973 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per1O35973 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per1O35973 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per1O35973 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Per1O35973 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Per1O35973 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Per1O35973 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Per1O35973 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.12■□□□□ 0.97
Per1O35973 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per1O35973 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Per1O35973 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Per1O35973 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.12■□□□□ 0.97
Per1O35973 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Per1O35973 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.12■□□□□ 0.97
Per1O35973 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.11■□□□□ 0.97
Per1O35973 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Per1O35973 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Per1O35973 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Per1O35973 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Per1O35973 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Per1O35973 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.1■□□□□ 0.97
Per1O35973 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Per1O35973 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.1■□□□□ 0.97
Per1O35973 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Per1O35973 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Per1O35973 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Per1O35973 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Per1O35973 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.09■□□□□ 0.97
Per1O35973 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Per1O35973 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Per1O35973 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Per1O35973 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC21.09■□□□□ 0.97
Per1O35973 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Per1O35973 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Per1O35973 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Per1O35973 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Per1O35973 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Per1O35973 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Per1O35973 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Per1O35973 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
Per1O35973 Gm13534-201ENSMUST00000121169 513 ntBASIC21.08■□□□□ 0.97
Per1O35973 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Per1O35973 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Per1O35973 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Per1O35973 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Per1O35973 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms