Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.56■□□□□ 0.56
Polr2jO08740 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2jO08740 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Polr2jO08740 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Polr2jO08740 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.55■□□□□ 0.56
Polr2jO08740 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr2jO08740 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Polr2jO08740 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr2jO08740 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Polr2jO08740 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Polr2jO08740 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.55■□□□□ 0.56
Polr2jO08740 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Polr2jO08740 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Polr2jO08740 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.55■□□□□ 0.56
Polr2jO08740 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.55■□□□□ 0.56
Polr2jO08740 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Polr2jO08740 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Polr2jO08740 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
Polr2jO08740 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr2jO08740 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Polr2jO08740 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Polr2jO08740 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Polr2jO08740 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Polr2jO08740 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Polr2jO08740 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Polr2jO08740 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Polr2jO08740 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr2jO08740 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Polr2jO08740 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.53■□□□□ 0.56
Polr2jO08740 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Polr2jO08740 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Polr2jO08740 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr2jO08740 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr2jO08740 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Polr2jO08740 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr2jO08740 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr2jO08740 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr2jO08740 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.53■□□□□ 0.56
Polr2jO08740 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Polr2jO08740 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Polr2jO08740 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.52■□□□□ 0.56
Polr2jO08740 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr2jO08740 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.52■□□□□ 0.56
Polr2jO08740 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Polr2jO08740 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.52■□□□□ 0.56
Polr2jO08740 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
Polr2jO08740 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr2jO08740 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Polr2jO08740 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Polr2jO08740 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Polr2jO08740 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Polr2jO08740 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Polr2jO08740 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.51■□□□□ 0.55
Polr2jO08740 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Polr2jO08740 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr2jO08740 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Polr2jO08740 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr2jO08740 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.51■□□□□ 0.55
Polr2jO08740 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr2jO08740 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Polr2jO08740 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Polr2jO08740 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr2jO08740 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr2jO08740 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr2jO08740 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr2jO08740 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Polr2jO08740 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Polr2jO08740 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr2jO08740 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.5■□□□□ 0.55
Polr2jO08740 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr2jO08740 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr2jO08740 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Polr2jO08740 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Polr2jO08740 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2jO08740 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Polr2jO08740 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2jO08740 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2jO08740 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2jO08740 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2jO08740 Gm5812-201ENSMUST00000061073 957 ntBASIC18.49■□□□□ 0.55
Polr2jO08740 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.49■□□□□ 0.55
Polr2jO08740 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2jO08740 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2jO08740 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2jO08740 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Polr2jO08740 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2jO08740 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2jO08740 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2jO08740 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2jO08740 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2jO08740 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.48■□□□□ 0.55
Polr2jO08740 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2jO08740 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2jO08740 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Polr2jO08740 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2jO08740 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2jO08740 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.48■□□□□ 0.55
Polr2jO08740 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Polr2jO08740 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Polr2jO08740 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms