Protein–RNA interactions for Protein: O08580

Esrra, Steroid hormone receptor ERR1, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EsrraO08580 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EsrraO08580 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EsrraO08580 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EsrraO08580 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EsrraO08580 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
EsrraO08580 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EsrraO08580 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
EsrraO08580 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EsrraO08580 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
EsrraO08580 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
EsrraO08580 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
EsrraO08580 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
EsrraO08580 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EsrraO08580 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EsrraO08580 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
EsrraO08580 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
EsrraO08580 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
EsrraO08580 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
EsrraO08580 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
EsrraO08580 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EsrraO08580 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
EsrraO08580 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
EsrraO08580 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EsrraO08580 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EsrraO08580 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
EsrraO08580 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.34■□□□□ 0.69
EsrraO08580 Gm43530-201ENSMUST00000195920 274 ntBASIC19.34■□□□□ 0.69
EsrraO08580 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.34■□□□□ 0.69
EsrraO08580 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.33■□□□□ 0.69
EsrraO08580 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
EsrraO08580 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
EsrraO08580 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.33■□□□□ 0.68
EsrraO08580 Gm7417-201ENSMUST00000192950 473 ntBASIC19.33■□□□□ 0.68
EsrraO08580 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EsrraO08580 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
EsrraO08580 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
EsrraO08580 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
EsrraO08580 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
EsrraO08580 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
EsrraO08580 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
EsrraO08580 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EsrraO08580 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EsrraO08580 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
EsrraO08580 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EsrraO08580 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.32■□□□□ 0.68
EsrraO08580 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.32■□□□□ 0.68
EsrraO08580 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EsrraO08580 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EsrraO08580 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
EsrraO08580 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EsrraO08580 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EsrraO08580 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
EsrraO08580 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
EsrraO08580 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
EsrraO08580 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EsrraO08580 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EsrraO08580 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EsrraO08580 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
EsrraO08580 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
EsrraO08580 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
EsrraO08580 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
EsrraO08580 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
EsrraO08580 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EsrraO08580 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EsrraO08580 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EsrraO08580 Golph3-205ENSMUST00000228671 2842 ntBASIC19.3■□□□□ 0.68
EsrraO08580 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EsrraO08580 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EsrraO08580 Gm9870-201ENSMUST00000063874 645 ntBASIC19.3■□□□□ 0.68
EsrraO08580 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
EsrraO08580 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.3■□□□□ 0.68
EsrraO08580 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EsrraO08580 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EsrraO08580 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
EsrraO08580 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
EsrraO08580 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
EsrraO08580 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EsrraO08580 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EsrraO08580 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
EsrraO08580 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EsrraO08580 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.29■□□□□ 0.68
EsrraO08580 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
EsrraO08580 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
EsrraO08580 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
EsrraO08580 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EsrraO08580 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
EsrraO08580 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EsrraO08580 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.28■□□□□ 0.68
EsrraO08580 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
EsrraO08580 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
EsrraO08580 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
EsrraO08580 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
EsrraO08580 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.28■□□□□ 0.68
EsrraO08580 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EsrraO08580 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
EsrraO08580 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
EsrraO08580 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
EsrraO08580 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
EsrraO08580 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
EsrraO08580 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms