Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm6408J3QNG1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm6408J3QNG1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm6408J3QNG1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm6408J3QNG1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.28■□□□□ 0.68
Gm6408J3QNG1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm6408J3QNG1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm6408J3QNG1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm6408J3QNG1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Gm6408J3QNG1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm6408J3QNG1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm6408J3QNG1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.28■□□□□ 0.68
Gm6408J3QNG1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.28■□□□□ 0.68
Gm6408J3QNG1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm6408J3QNG1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm6408J3QNG1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm6408J3QNG1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm6408J3QNG1 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm6408J3QNG1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm6408J3QNG1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm6408J3QNG1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Gm6408J3QNG1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Gm6408J3QNG1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm6408J3QNG1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm6408J3QNG1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Gm6408J3QNG1 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm6408J3QNG1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6408J3QNG1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6408J3QNG1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6408J3QNG1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6408J3QNG1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6408J3QNG1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.25■□□□□ 0.67
Gm6408J3QNG1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6408J3QNG1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6408J3QNG1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6408J3QNG1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm6408J3QNG1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm6408J3QNG1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Gm6408J3QNG1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.22■□□□□ 0.67
Gm6408J3QNG1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms