Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Krt28A6BLY7 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Krt28A6BLY7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.62■■□□□ 1.05
Krt28A6BLY7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Krt28A6BLY7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Krt28A6BLY7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Krt28A6BLY7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.62■■□□□ 1.05
Krt28A6BLY7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Krt28A6BLY7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Krt28A6BLY7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.61■■□□□ 1.05
Krt28A6BLY7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.61■■□□□ 1.05
Krt28A6BLY7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Krt28A6BLY7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Krt28A6BLY7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Krt28A6BLY7 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.61■■□□□ 1.05
Krt28A6BLY7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Krt28A6BLY7 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
Krt28A6BLY7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Krt28A6BLY7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Krt28A6BLY7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Krt28A6BLY7 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Krt28A6BLY7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.6■■□□□ 1.05
Krt28A6BLY7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Krt28A6BLY7 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.6■■□□□ 1.05
Krt28A6BLY7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Krt28A6BLY7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Krt28A6BLY7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Krt28A6BLY7 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Krt28A6BLY7 Gm715-201ENSMUST00000117865 831 ntBASIC21.59■■□□□ 1.05
Krt28A6BLY7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC21.59■■□□□ 1.05
Krt28A6BLY7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Krt28A6BLY7 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Krt28A6BLY7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Krt28A6BLY7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Krt28A6BLY7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Krt28A6BLY7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Krt28A6BLY7 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.58■■□□□ 1.05
Krt28A6BLY7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Krt28A6BLY7 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.58■■□□□ 1.05
Krt28A6BLY7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC21.58■■□□□ 1.05
Krt28A6BLY7 Gm2559-201ENSMUST00000201323 363 ntBASIC21.58■■□□□ 1.05
Krt28A6BLY7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.58■■□□□ 1.05
Krt28A6BLY7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
Krt28A6BLY7 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Krt28A6BLY7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Krt28A6BLY7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Krt28A6BLY7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC21.58■■□□□ 1.04
Krt28A6BLY7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt28A6BLY7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
Krt28A6BLY7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC21.57■■□□□ 1.04
Krt28A6BLY7 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Krt28A6BLY7 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.57■■□□□ 1.04
Krt28A6BLY7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt28A6BLY7 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Krt28A6BLY7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt28A6BLY7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt28A6BLY7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt28A6BLY7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Krt28A6BLY7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt28A6BLY7 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt28A6BLY7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.56■■□□□ 1.04
Krt28A6BLY7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Krt28A6BLY7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Krt28A6BLY7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt28A6BLY7 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.56■■□□□ 1.04
Krt28A6BLY7 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.56■■□□□ 1.04
Krt28A6BLY7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt28A6BLY7 AA386476-201ENSMUST00000098781 1665 ntBASIC21.56■■□□□ 1.04
Krt28A6BLY7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt28A6BLY7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC21.55■■□□□ 1.04
Krt28A6BLY7 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt28A6BLY7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Krt28A6BLY7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Krt28A6BLY7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Krt28A6BLY7 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Krt28A6BLY7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Krt28A6BLY7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Krt28A6BLY7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Krt28A6BLY7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC21.53■■□□□ 1.04
Krt28A6BLY7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Krt28A6BLY7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Krt28A6BLY7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Krt28A6BLY7 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Krt28A6BLY7 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC21.53■■□□□ 1.04
Krt28A6BLY7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms