Protein–RNA interactions for Protein: A0A140T8M3

Igkv8-30, Immunoglobulin kappa chain variable 8-30 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-30A0A140T8M3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Igkv8-30A0A140T8M3 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.32□□□□□ -0.44
Igkv8-30A0A140T8M3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Gm6311-201ENSMUST00000073790 878 ntBASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Igkv8-30A0A140T8M3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Gm6802-201ENSMUST00000167843 1983 ntBASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Igkv8-30A0A140T8M3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Igkv8-30A0A140T8M3 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-30A0A140T8M3 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-30A0A140T8M3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-30A0A140T8M3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-30A0A140T8M3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Igkv8-30A0A140T8M3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.28□□□□□ -0.44
Igkv8-30A0A140T8M3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms