Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13n-4A0A0G2JG01 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trav13n-4A0A0G2JG01 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Trav13n-4A0A0G2JG01 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Gm7143-201ENSMUST00000222811 859 ntBASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13n-4A0A0G2JG01 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-4A0A0G2JG01 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav13n-4A0A0G2JG01 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-4A0A0G2JG01 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-4A0A0G2JG01 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-4A0A0G2JG01 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.64■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gm5874-201ENSMUST00000096101 508 ntBASIC15.64■□□□□ 0.09
Trav13n-4A0A0G2JG01 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-4A0A0G2JG01 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
Trav13n-4A0A0G2JG01 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13n-4A0A0G2JG01 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13n-4A0A0G2JG01 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13n-4A0A0G2JG01 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Trav13n-4A0A0G2JG01 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-4A0A0G2JG01 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-4A0A0G2JG01 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-4A0A0G2JG01 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-4A0A0G2JG01 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-4A0A0G2JG01 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gm29257-201ENSMUST00000186115 639 ntBASIC15.6■□□□□ 0.09
Trav13n-4A0A0G2JG01 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-4A0A0G2JG01 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-4A0A0G2JG01 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-4A0A0G2JG01 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13n-4A0A0G2JG01 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms