Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.33■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.3■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Etf1-202ENSMUST00000180351 108 ntBASIC18.3■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.3■□□□□ 0.52
Sirpb1aA0A0A6YYP6 AA386476-201ENSMUST00000098781 1665 ntBASIC18.3■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.3■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.3■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Gm15039-201ENSMUST00000118914 875 ntBASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sirpb1aA0A0A6YYP6 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Sirpb1aA0A0A6YYP6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms