Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Gm14117-201ENSMUST00000122417 843 ntBASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv23A0A0A6YWQ1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv23A0A0A6YWQ1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv23A0A0A6YWQ1 Gm45102-201ENSMUST00000207427 857 ntBASIC16.6■□□□□ 0.25
Trbv23A0A0A6YWQ1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.6■□□□□ 0.25
Trbv23A0A0A6YWQ1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv23A0A0A6YWQ1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trbv23A0A0A6YWQ1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv23A0A0A6YWQ1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv23A0A0A6YWQ1 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv23A0A0A6YWQ1 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv23A0A0A6YWQ1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trbv23A0A0A6YWQ1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv23A0A0A6YWQ1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC16.59■□□□□ 0.25
Trbv23A0A0A6YWQ1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv23A0A0A6YWQ1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv23A0A0A6YWQ1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv23A0A0A6YWQ1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv23A0A0A6YWQ1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.59■□□□□ 0.25
Trbv23A0A0A6YWQ1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv23A0A0A6YWQ1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv23A0A0A6YWQ1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv23A0A0A6YWQ1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv23A0A0A6YWQ1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv23A0A0A6YWQ1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv23A0A0A6YWQ1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.58■□□□□ 0.24
Trbv23A0A0A6YWQ1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv23A0A0A6YWQ1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv23A0A0A6YWQ1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv23A0A0A6YWQ1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv23A0A0A6YWQ1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv23A0A0A6YWQ1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv23A0A0A6YWQ1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv23A0A0A6YWQ1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv23A0A0A6YWQ1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv23A0A0A6YWQ1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv23A0A0A6YWQ1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trbv23A0A0A6YWQ1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv23A0A0A6YWQ1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv23A0A0A6YWQ1 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trbv23A0A0A6YWQ1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv23A0A0A6YWQ1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv23A0A0A6YWQ1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trbv23A0A0A6YWQ1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv23A0A0A6YWQ1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv23A0A0A6YWQ1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv23A0A0A6YWQ1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv23A0A0A6YWQ1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv23A0A0A6YWQ1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv23A0A0A6YWQ1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv23A0A0A6YWQ1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv23A0A0A6YWQ1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms