Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav6d-5A0A075B6B9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav6d-5A0A075B6B9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav6d-5A0A075B6B9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav6d-5A0A075B6B9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Grk6-206ENSMUST00000224995 2971 ntBASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav6d-5A0A075B6B9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Gm43566-201ENSMUST00000196851 808 ntBASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav6d-5A0A075B6B9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms