Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trav7-6A0A075B640 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.53□□□□□ -0.24
Trav7-6A0A075B640 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7-6A0A075B640 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7-6A0A075B640 Golph3-205ENSMUST00000228671 2842 ntBASIC13.52□□□□□ -0.24
Trav7-6A0A075B640 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7-6A0A075B640 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7-6A0A075B640 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7-6A0A075B640 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav7-6A0A075B640 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Mir6236-201ENSMUST00000184437 123 ntBASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Gm5522-201ENSMUST00000189483 1242 ntBASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Gm7417-201ENSMUST00000192950 473 ntBASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav7-6A0A075B640 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Gm9870-201ENSMUST00000063874 645 ntBASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav7-6A0A075B640 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav7-6A0A075B640 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav7-6A0A075B640 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms