Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav4d-3A0A075B625 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav4d-3A0A075B625 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 AC124603.1-201ENSMUST00000223843 308 ntBASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 AC167019.3-201ENSMUST00000228225 1266 ntBASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav4d-3A0A075B625 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav4d-3A0A075B625 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav4d-3A0A075B625 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms