Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav7n-4A0A075B620 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Gm45141-201ENSMUST00000206502 1888 ntBASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav7n-4A0A075B620 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav7n-4A0A075B620 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Gm18688-201ENSMUST00000204695 1859 ntBASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav7n-4A0A075B620 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav7n-4A0A075B620 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Trav7n-4A0A075B620 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms