Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4bQ9ES00 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ube4bQ9ES00 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ube4bQ9ES00 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ube4bQ9ES00 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ube4bQ9ES00 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4bQ9ES00 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Ube4bQ9ES00 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4bQ9ES00 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
Ube4bQ9ES00 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ube4bQ9ES00 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.64■□□□□ 0.57
Ube4bQ9ES00 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4bQ9ES00 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.64■□□□□ 0.57
Ube4bQ9ES00 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4bQ9ES00 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4bQ9ES00 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ube4bQ9ES00 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4bQ9ES00 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4bQ9ES00 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4bQ9ES00 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4bQ9ES00 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Ube4bQ9ES00 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4bQ9ES00 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ube4bQ9ES00 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4bQ9ES00 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ube4bQ9ES00 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4bQ9ES00 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.62■□□□□ 0.57
Ube4bQ9ES00 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4bQ9ES00 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4bQ9ES00 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4bQ9ES00 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ube4bQ9ES00 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Cap2-205ENSMUST00000225824 1634 ntBASIC18.61■□□□□ 0.57
Ube4bQ9ES00 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ube4bQ9ES00 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4bQ9ES00 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4bQ9ES00 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4bQ9ES00 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4bQ9ES00 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4bQ9ES00 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4bQ9ES00 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4bQ9ES00 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.6■□□□□ 0.57
Ube4bQ9ES00 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4bQ9ES00 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ube4bQ9ES00 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ube4bQ9ES00 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ube4bQ9ES00 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ube4bQ9ES00 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ube4bQ9ES00 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ube4bQ9ES00 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4bQ9ES00 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4bQ9ES00 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ube4bQ9ES00 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ube4bQ9ES00 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms