Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.32■□□□□ 0.84
Cpne8Q9DC53 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpne8Q9DC53 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne8Q9DC53 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne8Q9DC53 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne8Q9DC53 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne8Q9DC53 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.31■□□□□ 0.84
Cpne8Q9DC53 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne8Q9DC53 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne8Q9DC53 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.31■□□□□ 0.84
Cpne8Q9DC53 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cpne8Q9DC53 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpne8Q9DC53 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.31■□□□□ 0.84
Cpne8Q9DC53 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Gm12251-201ENSMUST00000117893 792 ntBASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Serp2-204ENSMUST00000228055 705 ntBASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpne8Q9DC53 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cpne8Q9DC53 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.29■□□□□ 0.84
Cpne8Q9DC53 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne8Q9DC53 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne8Q9DC53 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cpne8Q9DC53 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne8Q9DC53 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpne8Q9DC53 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.29■□□□□ 0.84
Cpne8Q9DC53 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.29■□□□□ 0.84
Cpne8Q9DC53 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.29■□□□□ 0.84
Cpne8Q9DC53 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.28■□□□□ 0.84
Cpne8Q9DC53 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpne8Q9DC53 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpne8Q9DC53 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.27■□□□□ 0.84
Cpne8Q9DC53 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpne8Q9DC53 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpne8Q9DC53 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpne8Q9DC53 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cpne8Q9DC53 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.27■□□□□ 0.83
Cpne8Q9DC53 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne8Q9DC53 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne8Q9DC53 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cpne8Q9DC53 Gm43137-201ENSMUST00000198052 594 ntBASIC20.26■□□□□ 0.83
Cpne8Q9DC53 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne8Q9DC53 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne8Q9DC53 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.26■□□□□ 0.83
Cpne8Q9DC53 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.26■□□□□ 0.83
Cpne8Q9DC53 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cpne8Q9DC53 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne8Q9DC53 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.26■□□□□ 0.83
Cpne8Q9DC53 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpne8Q9DC53 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne8Q9DC53 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne8Q9DC53 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne8Q9DC53 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.25■□□□□ 0.83
Cpne8Q9DC53 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne8Q9DC53 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cpne8Q9DC53 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne8Q9DC53 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cpne8Q9DC53 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.25■□□□□ 0.83
Cpne8Q9DC53 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpne8Q9DC53 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms