Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cir1Q9DA19 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Cir1Q9DA19 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.83■□□□□ 0.28
Cir1Q9DA19 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Cir1Q9DA19 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Cir1Q9DA19 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cir1Q9DA19 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.83■□□□□ 0.28
Cir1Q9DA19 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Cir1Q9DA19 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cir1Q9DA19 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cir1Q9DA19 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Cir1Q9DA19 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cir1Q9DA19 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.82■□□□□ 0.28
Cir1Q9DA19 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cir1Q9DA19 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cir1Q9DA19 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Gm12922-201ENSMUST00000120626 809 ntBASIC16.81■□□□□ 0.28
Cir1Q9DA19 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cir1Q9DA19 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cir1Q9DA19 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC16.8■□□□□ 0.28
Cir1Q9DA19 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cir1Q9DA19 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cir1Q9DA19 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.79■□□□□ 0.28
Cir1Q9DA19 Gm10399-202ENSMUST00000202768 748 ntBASIC16.79■□□□□ 0.28
Cir1Q9DA19 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cir1Q9DA19 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cir1Q9DA19 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cir1Q9DA19 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cir1Q9DA19 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cir1Q9DA19 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cir1Q9DA19 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cir1Q9DA19 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cir1Q9DA19 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cir1Q9DA19 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cir1Q9DA19 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cir1Q9DA19 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cir1Q9DA19 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.77■□□□□ 0.27
Cir1Q9DA19 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cir1Q9DA19 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cir1Q9DA19 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cir1Q9DA19 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cir1Q9DA19 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms