Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chaf1bQ9D0N7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Chaf1bQ9D0N7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.26■□□□□ 0.51
Chaf1bQ9D0N7 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.26■□□□□ 0.51
Chaf1bQ9D0N7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chaf1bQ9D0N7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chaf1bQ9D0N7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chaf1bQ9D0N7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Chaf1bQ9D0N7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chaf1bQ9D0N7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Chaf1bQ9D0N7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Chaf1bQ9D0N7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chaf1bQ9D0N7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chaf1bQ9D0N7 Gm7143-201ENSMUST00000222811 859 ntBASIC18.25■□□□□ 0.51
Chaf1bQ9D0N7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chaf1bQ9D0N7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chaf1bQ9D0N7 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chaf1bQ9D0N7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chaf1bQ9D0N7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chaf1bQ9D0N7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.23■□□□□ 0.51
Chaf1bQ9D0N7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.23■□□□□ 0.51
Chaf1bQ9D0N7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chaf1bQ9D0N7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chaf1bQ9D0N7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chaf1bQ9D0N7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Chaf1bQ9D0N7 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Chaf1bQ9D0N7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chaf1bQ9D0N7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chaf1bQ9D0N7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chaf1bQ9D0N7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chaf1bQ9D0N7 Gm43566-201ENSMUST00000196851 808 ntBASIC18.2■□□□□ 0.5
Chaf1bQ9D0N7 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chaf1bQ9D0N7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chaf1bQ9D0N7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chaf1bQ9D0N7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Chaf1bQ9D0N7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chaf1bQ9D0N7 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chaf1bQ9D0N7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chaf1bQ9D0N7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Chaf1bQ9D0N7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Mir6236-201ENSMUST00000184437 123 ntBASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Gm10232-201ENSMUST00000089221 720 ntBASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Chaf1bQ9D0N7 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms