Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rnf135Q9CWS1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf135Q9CWS1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf135Q9CWS1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf135Q9CWS1 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf135Q9CWS1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf135Q9CWS1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf135Q9CWS1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf135Q9CWS1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rnf135Q9CWS1 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf135Q9CWS1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf135Q9CWS1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf135Q9CWS1 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf135Q9CWS1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf135Q9CWS1 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf135Q9CWS1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf135Q9CWS1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf135Q9CWS1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf135Q9CWS1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rnf135Q9CWS1 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.19■□□□□ 0.82
Rnf135Q9CWS1 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf135Q9CWS1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf135Q9CWS1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.19■□□□□ 0.82
Rnf135Q9CWS1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.19■□□□□ 0.82
Rnf135Q9CWS1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf135Q9CWS1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf135Q9CWS1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf135Q9CWS1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf135Q9CWS1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rnf135Q9CWS1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.18■□□□□ 0.82
Rnf135Q9CWS1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Rnf135Q9CWS1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.17■□□□□ 0.82
Rnf135Q9CWS1 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf135Q9CWS1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf135Q9CWS1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf135Q9CWS1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf135Q9CWS1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf135Q9CWS1 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.17■□□□□ 0.82
Rnf135Q9CWS1 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Rnf135Q9CWS1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rnf135Q9CWS1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rnf135Q9CWS1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf135Q9CWS1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rnf135Q9CWS1 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf135Q9CWS1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf135Q9CWS1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf135Q9CWS1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf135Q9CWS1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Rnf135Q9CWS1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.13■□□□□ 0.81
Rnf135Q9CWS1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.13■□□□□ 0.81
Rnf135Q9CWS1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf135Q9CWS1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf135Q9CWS1 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Rnf135Q9CWS1 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf135Q9CWS1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf135Q9CWS1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.12■□□□□ 0.81
Rnf135Q9CWS1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf135Q9CWS1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf135Q9CWS1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf135Q9CWS1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
Rnf135Q9CWS1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rnf135Q9CWS1 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf135Q9CWS1 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms