Protein–RNA interactions for Protein: Q9CQC0

Tpbpb, Trophoblast-specific protein beta, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpbQ9CQC0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TpbpbQ9CQC0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TpbpbQ9CQC0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TpbpbQ9CQC0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TpbpbQ9CQC0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Gm7143-201ENSMUST00000222811 859 ntBASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TpbpbQ9CQC0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TpbpbQ9CQC0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TpbpbQ9CQC0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TpbpbQ9CQC0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TpbpbQ9CQC0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Mir6236-201ENSMUST00000184437 123 ntBASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TpbpbQ9CQC0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TpbpbQ9CQC0 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TpbpbQ9CQC0 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TpbpbQ9CQC0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TpbpbQ9CQC0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.31■□□□□ 0.36
TpbpbQ9CQC0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TpbpbQ9CQC0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TpbpbQ9CQC0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TpbpbQ9CQC0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TpbpbQ9CQC0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TpbpbQ9CQC0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TpbpbQ9CQC0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TpbpbQ9CQC0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
TpbpbQ9CQC0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TpbpbQ9CQC0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TpbpbQ9CQC0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TpbpbQ9CQC0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TpbpbQ9CQC0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.3■□□□□ 0.36
TpbpbQ9CQC0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.3■□□□□ 0.36
TpbpbQ9CQC0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TpbpbQ9CQC0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TpbpbQ9CQC0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TpbpbQ9CQC0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TpbpbQ9CQC0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.29■□□□□ 0.36
TpbpbQ9CQC0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TpbpbQ9CQC0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TpbpbQ9CQC0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TpbpbQ9CQC0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TpbpbQ9CQC0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TpbpbQ9CQC0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TpbpbQ9CQC0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.28■□□□□ 0.36
TpbpbQ9CQC0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TpbpbQ9CQC0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms