Protein–RNA interactions for Protein: Q9BWJ5

SF3B5, Splicing factor 3B subunit 5, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5Q9BWJ5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 AC127496.7-201ENST00000625110 1798 ntBASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 MIR939-201ENST00000401314 82 ntBASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SF3B5Q9BWJ5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 AC010141.3-201ENST00000456659 717 ntBASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 AC091305.1-201ENST00000479476 895 ntBASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 AC008764.7-201ENST00000593779 1081 ntBASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SF3B5Q9BWJ5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 RASA4CP-201ENST00000424092 1398 ntBASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 AC099791.1-201ENST00000416440 715 ntBASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 SUDS3P1-201ENST00000505831 966 ntBASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 AF213884.3-201ENST00000563833 479 ntBASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 AC126544.1-201ENST00000580842 1059 ntBASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 AC005837.3-201ENST00000612163 286 ntBASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 AL136967.2-201ENST00000623968 743 ntBASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SF3B5Q9BWJ5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 MIR638-201ENST00000385237 100 ntBASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.45■□□□□ 0.7
SF3B5Q9BWJ5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SF3B5Q9BWJ5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SF3B5Q9BWJ5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SF3B5Q9BWJ5 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SF3B5Q9BWJ5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.43■□□□□ 0.7
SF3B5Q9BWJ5 AC142381.2-201ENST00000566120 298 ntBASIC19.43■□□□□ 0.7
SF3B5Q9BWJ5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SF3B5Q9BWJ5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SF3B5Q9BWJ5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SF3B5Q9BWJ5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SF3B5Q9BWJ5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SF3B5Q9BWJ5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SF3B5Q9BWJ5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SF3B5Q9BWJ5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.42■□□□□ 0.7
SF3B5Q9BWJ5 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SF3B5Q9BWJ5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.42■□□□□ 0.7
SF3B5Q9BWJ5 IGHV3-19-201ENST00000521488 291 ntBASIC19.42■□□□□ 0.7
SF3B5Q9BWJ5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.42■□□□□ 0.7
SF3B5Q9BWJ5 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SF3B5Q9BWJ5 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.42■□□□□ 0.7
SF3B5Q9BWJ5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SF3B5Q9BWJ5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SF3B5Q9BWJ5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms