Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim8Q99PJ2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19■□□□□ 0.63
Trim8Q99PJ2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trim8Q99PJ2 Gm43530-201ENSMUST00000195920 274 ntBASIC19■□□□□ 0.63
Trim8Q99PJ2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19■□□□□ 0.63
Trim8Q99PJ2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19■□□□□ 0.63
Trim8Q99PJ2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim8Q99PJ2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim8Q99PJ2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trim8Q99PJ2 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trim8Q99PJ2 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Gm9870-201ENSMUST00000063874 645 ntBASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trim8Q99PJ2 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trim8Q99PJ2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Trim8Q99PJ2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.96■□□□□ 0.63
Trim8Q99PJ2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim8Q99PJ2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim8Q99PJ2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim8Q99PJ2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim8Q99PJ2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Trim8Q99PJ2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trim8Q99PJ2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim8Q99PJ2 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Trim8Q99PJ2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Trim8Q99PJ2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim8Q99PJ2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.95■□□□□ 0.62
Trim8Q99PJ2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim8Q99PJ2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim8Q99PJ2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim8Q99PJ2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim8Q99PJ2 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trim8Q99PJ2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Gm14117-201ENSMUST00000122417 843 ntBASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Gm9959-201ENSMUST00000068277 390 ntBASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trim8Q99PJ2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim8Q99PJ2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim8Q99PJ2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim8Q99PJ2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Trim8Q99PJ2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
Trim8Q99PJ2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim8Q99PJ2 Gm45102-201ENSMUST00000207427 857 ntBASIC18.93■□□□□ 0.62
Trim8Q99PJ2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim8Q99PJ2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trim8Q99PJ2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trim8Q99PJ2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trim8Q99PJ2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms