Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF2Q99805 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF2Q99805 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF2Q99805 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.19■□□□□ 0.82
TM9SF2Q99805 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF2Q99805 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TM9SF2Q99805 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF2Q99805 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF2Q99805 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TM9SF2Q99805 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF2Q99805 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF2Q99805 ECEL1P1-201ENST00000373592 1742 ntBASIC20.19■□□□□ 0.82
TM9SF2Q99805 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.19■□□□□ 0.82
TM9SF2Q99805 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF2Q99805 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF2Q99805 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF2Q99805 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF2Q99805 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.18■□□□□ 0.82
TM9SF2Q99805 AC142381.2-201ENST00000566120 298 ntBASIC20.18■□□□□ 0.82
TM9SF2Q99805 AC099791.2-201ENST00000605725 427 ntBASIC20.18■□□□□ 0.82
TM9SF2Q99805 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF2Q99805 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF2Q99805 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF2Q99805 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF2Q99805 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF2Q99805 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TM9SF2Q99805 AC137767.1-201ENST00000602918 1920 ntBASIC20.17■□□□□ 0.82
TM9SF2Q99805 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF2Q99805 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TM9SF2Q99805 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF2Q99805 AL138724.1-201ENST00000606771 1088 ntBASIC20.17■□□□□ 0.82
TM9SF2Q99805 AL355001.2-201ENST00000620617 1191 ntBASIC20.17■□□□□ 0.82
TM9SF2Q99805 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.17■□□□□ 0.82
TM9SF2Q99805 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.17■□□□□ 0.82
TM9SF2Q99805 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF2Q99805 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TM9SF2Q99805 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF2Q99805 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF2Q99805 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF2Q99805 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.16■□□□□ 0.82
TM9SF2Q99805 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.16■□□□□ 0.82
TM9SF2Q99805 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TM9SF2Q99805 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF2Q99805 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF2Q99805 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
TM9SF2Q99805 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TM9SF2Q99805 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.16■□□□□ 0.82
TM9SF2Q99805 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.15■□□□□ 0.82
TM9SF2Q99805 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.15■□□□□ 0.82
TM9SF2Q99805 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TM9SF2Q99805 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TM9SF2Q99805 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM9SF2Q99805 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TM9SF2Q99805 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.15■□□□□ 0.82
TM9SF2Q99805 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.15■□□□□ 0.82
TM9SF2Q99805 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM9SF2Q99805 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM9SF2Q99805 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
TM9SF2Q99805 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TM9SF2Q99805 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
TM9SF2Q99805 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TM9SF2Q99805 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.14■□□□□ 0.81
TM9SF2Q99805 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TM9SF2Q99805 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM9SF2Q99805 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TM9SF2Q99805 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM9SF2Q99805 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM9SF2Q99805 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM9SF2Q99805 PKD1P6-201ENST00000343738 4769 ntBASIC20.14■□□□□ 0.81
TM9SF2Q99805 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TM9SF2Q99805 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.14■□□□□ 0.81
TM9SF2Q99805 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF2Q99805 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.13■□□□□ 0.81
TM9SF2Q99805 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.13■□□□□ 0.81
TM9SF2Q99805 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TM9SF2Q99805 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.13■□□□□ 0.81
TM9SF2Q99805 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF2Q99805 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF2Q99805 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF2Q99805 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF2Q99805 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF2Q99805 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.13■□□□□ 0.81
TM9SF2Q99805 MIR935-201ENST00000401179 91 ntBASIC20.13■□□□□ 0.81
TM9SF2Q99805 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.13■□□□□ 0.81
TM9SF2Q99805 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.13■□□□□ 0.81
TM9SF2Q99805 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
TM9SF2Q99805 AC011298.3-201ENST00000615796 283 ntBASIC20.13■□□□□ 0.81
TM9SF2Q99805 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
TM9SF2Q99805 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF2Q99805 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.13■□□□□ 0.81
TM9SF2Q99805 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TM9SF2Q99805 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.12■□□□□ 0.81
TM9SF2Q99805 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TM9SF2Q99805 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM9SF2Q99805 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.12■□□□□ 0.81
TM9SF2Q99805 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TM9SF2Q99805 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TM9SF2Q99805 SERBP1P1-201ENST00000396021 1160 ntBASIC20.12■□□□□ 0.81
TM9SF2Q99805 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.12■□□□□ 0.81
TM9SF2Q99805 SUDS3P1-201ENST00000505831 966 ntBASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms