Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh18Q8VHR0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh18Q8VHR0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh18Q8VHR0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh18Q8VHR0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh18Q8VHR0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh18Q8VHR0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh18Q8VHR0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh18Q8VHR0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pcdh18Q8VHR0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdh18Q8VHR0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh18Q8VHR0 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh18Q8VHR0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdh18Q8VHR0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 Gm15820-201ENSMUST00000201566 728 ntBASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdh18Q8VHR0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdh18Q8VHR0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh18Q8VHR0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh18Q8VHR0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdh18Q8VHR0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pcdh18Q8VHR0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh18Q8VHR0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh18Q8VHR0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh18Q8VHR0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdh18Q8VHR0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Pcdh18Q8VHR0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Pcdh18Q8VHR0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.61■□□□□ 0.57
Pcdh18Q8VHR0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh18Q8VHR0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh18Q8VHR0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh18Q8VHR0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh18Q8VHR0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh18Q8VHR0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh18Q8VHR0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh18Q8VHR0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh18Q8VHR0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh18Q8VHR0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdh18Q8VHR0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.59■□□□□ 0.57
Pcdh18Q8VHR0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh18Q8VHR0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh18Q8VHR0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdh18Q8VHR0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Pcdh18Q8VHR0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Pcdh18Q8VHR0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdh18Q8VHR0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Pcdh18Q8VHR0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms