Protein–RNA interactions for Protein: Q8R3K3

Ptcd2, Pentatricopeptide repeat-containing protein 2, mitochondrial, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd2Q8R3K3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ptcd2Q8R3K3 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ptcd2Q8R3K3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ptcd2Q8R3K3 Dio3-201ENSMUST00000097228 1449 ntBASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Gm15378-201ENSMUST00000121894 207 ntBASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ptcd2Q8R3K3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Gm10698-201ENSMUST00000182663 604 ntBASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ptcd2Q8R3K3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.91
Ptcd2Q8R3K3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ptcd2Q8R3K3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd2Q8R3K3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd2Q8R3K3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ptcd2Q8R3K3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd2Q8R3K3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Ptcd2Q8R3K3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd2Q8R3K3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd2Q8R3K3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ptcd2Q8R3K3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd2Q8R3K3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Ptcd2Q8R3K3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Ptcd2Q8R3K3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd2Q8R3K3 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd2Q8R3K3 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd2Q8R3K3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd2Q8R3K3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd2Q8R3K3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd2Q8R3K3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
Ptcd2Q8R3K3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ptcd2Q8R3K3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ptcd2Q8R3K3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptcd2Q8R3K3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ptcd2Q8R3K3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Ptcd2Q8R3K3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.67■□□□□ 0.9
Ptcd2Q8R3K3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ptcd2Q8R3K3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
Ptcd2Q8R3K3 Gm10517-202ENSMUST00000192970 758 ntBASIC20.67■□□□□ 0.9
Ptcd2Q8R3K3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ptcd2Q8R3K3 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.67■□□□□ 0.9
Ptcd2Q8R3K3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ptcd2Q8R3K3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd2Q8R3K3 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd2Q8R3K3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd2Q8R3K3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
Ptcd2Q8R3K3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ptcd2Q8R3K3 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.65■□□□□ 0.9
Ptcd2Q8R3K3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Ptcd2Q8R3K3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ptcd2Q8R3K3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms