Protein–RNA interactions for Protein: Q8R2E1

Vmn1r38, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r38Q8R2E1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r38Q8R2E1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Vmn1r38Q8R2E1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r38Q8R2E1 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r38Q8R2E1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r38Q8R2E1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vmn1r38Q8R2E1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r38Q8R2E1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r38Q8R2E1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.22■□□□□ 0.51
Vmn1r38Q8R2E1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Vmn1r38Q8R2E1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r38Q8R2E1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vmn1r38Q8R2E1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vmn1r38Q8R2E1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r38Q8R2E1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Vmn1r38Q8R2E1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r38Q8R2E1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Vmn1r38Q8R2E1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r38Q8R2E1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r38Q8R2E1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.21■□□□□ 0.51
Vmn1r38Q8R2E1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r38Q8R2E1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r38Q8R2E1 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r38Q8R2E1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vmn1r38Q8R2E1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r38Q8R2E1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r38Q8R2E1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vmn1r38Q8R2E1 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 AA386476-201ENSMUST00000098781 1665 ntBASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Gm7417-201ENSMUST00000192950 473 ntBASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vmn1r38Q8R2E1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.18■□□□□ 0.5
Vmn1r38Q8R2E1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vmn1r38Q8R2E1 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vmn1r38Q8R2E1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r38Q8R2E1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r38Q8R2E1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r38Q8R2E1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r38Q8R2E1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r38Q8R2E1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.15■□□□□ 0.5
Vmn1r38Q8R2E1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.15■□□□□ 0.5
Vmn1r38Q8R2E1 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.15■□□□□ 0.5
Vmn1r38Q8R2E1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r38Q8R2E1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vmn1r38Q8R2E1 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms