Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sox30Q8CGW4 Gm6627-201ENSMUST00000218299 2386 ntBASIC21.4■■□□□ 1.02
Sox30Q8CGW4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox30Q8CGW4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox30Q8CGW4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox30Q8CGW4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox30Q8CGW4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.4■■□□□ 1.02
Sox30Q8CGW4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox30Q8CGW4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Sox30Q8CGW4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox30Q8CGW4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sox30Q8CGW4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sox30Q8CGW4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sox30Q8CGW4 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Sox30Q8CGW4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Sox30Q8CGW4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sox30Q8CGW4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.39■■□□□ 1.01
Sox30Q8CGW4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Sox30Q8CGW4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Sox30Q8CGW4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox30Q8CGW4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Sox30Q8CGW4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox30Q8CGW4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox30Q8CGW4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sox30Q8CGW4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.38■■□□□ 1.01
Sox30Q8CGW4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox30Q8CGW4 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.38■■□□□ 1.01
Sox30Q8CGW4 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.38■■□□□ 1.01
Sox30Q8CGW4 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC21.38■■□□□ 1.01
Sox30Q8CGW4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sox30Q8CGW4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.37■■□□□ 1.01
Sox30Q8CGW4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox30Q8CGW4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sox30Q8CGW4 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.37■■□□□ 1.01
Sox30Q8CGW4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox30Q8CGW4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Sox30Q8CGW4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sox30Q8CGW4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sox30Q8CGW4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox30Q8CGW4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox30Q8CGW4 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox30Q8CGW4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.36■■□□□ 1.01
Sox30Q8CGW4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sox30Q8CGW4 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.36■■□□□ 1.01
Sox30Q8CGW4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sox30Q8CGW4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox30Q8CGW4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox30Q8CGW4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sox30Q8CGW4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Gm22238-201ENSMUST00000175222 88 ntBASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Serp2-204ENSMUST00000228055 705 ntBASIC21.34■■□□□ 1.01
Sox30Q8CGW4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sox30Q8CGW4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Sox30Q8CGW4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox30Q8CGW4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox30Q8CGW4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox30Q8CGW4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox30Q8CGW4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Sox30Q8CGW4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.33■■□□□ 1.01
Sox30Q8CGW4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox30Q8CGW4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sox30Q8CGW4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sox30Q8CGW4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sox30Q8CGW4 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
Sox30Q8CGW4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.32■■□□□ 1
Sox30Q8CGW4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox30Q8CGW4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox30Q8CGW4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sox30Q8CGW4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Sox30Q8CGW4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.32■■□□□ 1
Sox30Q8CGW4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sox30Q8CGW4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Sox30Q8CGW4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox30Q8CGW4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox30Q8CGW4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox30Q8CGW4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Sox30Q8CGW4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sox30Q8CGW4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.31■■□□□ 1
Sox30Q8CGW4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.31■■□□□ 1
Sox30Q8CGW4 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms