Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shisa4Q8CA71 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Shisa4Q8CA71 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.83■■□□□ 1.25
Shisa4Q8CA71 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shisa4Q8CA71 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shisa4Q8CA71 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shisa4Q8CA71 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shisa4Q8CA71 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Shisa4Q8CA71 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Shisa4Q8CA71 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Shisa4Q8CA71 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Shisa4Q8CA71 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Shisa4Q8CA71 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.82■■□□□ 1.24
Shisa4Q8CA71 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shisa4Q8CA71 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Shisa4Q8CA71 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Shisa4Q8CA71 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Shisa4Q8CA71 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC22.81■■□□□ 1.24
Shisa4Q8CA71 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Shisa4Q8CA71 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC22.81■■□□□ 1.24
Shisa4Q8CA71 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Shisa4Q8CA71 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Shisa4Q8CA71 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Gm32699-201ENSMUST00000221728 1988 ntBASIC22.8■■□□□ 1.24
Shisa4Q8CA71 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Shisa4Q8CA71 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shisa4Q8CA71 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.79■■□□□ 1.24
Shisa4Q8CA71 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shisa4Q8CA71 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
Shisa4Q8CA71 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Shisa4Q8CA71 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC22.79■■□□□ 1.24
Shisa4Q8CA71 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.78■■□□□ 1.24
Shisa4Q8CA71 Gm27801-201ENSMUST00000184174 223 ntBASIC22.78■■□□□ 1.24
Shisa4Q8CA71 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Shisa4Q8CA71 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Shisa4Q8CA71 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shisa4Q8CA71 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shisa4Q8CA71 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Shisa4Q8CA71 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shisa4Q8CA71 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Shisa4Q8CA71 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Shisa4Q8CA71 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.77■■□□□ 1.24
Shisa4Q8CA71 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shisa4Q8CA71 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Shisa4Q8CA71 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Shisa4Q8CA71 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shisa4Q8CA71 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.77■■□□□ 1.24
Shisa4Q8CA71 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Shisa4Q8CA71 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Shisa4Q8CA71 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
Shisa4Q8CA71 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Notumos-201ENSMUST00000151998 2659 ntBASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Shisa4Q8CA71 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shisa4Q8CA71 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shisa4Q8CA71 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC22.75■■□□□ 1.23
Shisa4Q8CA71 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.75■■□□□ 1.23
Shisa4Q8CA71 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Shisa4Q8CA71 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.75■■□□□ 1.23
Shisa4Q8CA71 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Shisa4Q8CA71 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Shisa4Q8CA71 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
Shisa4Q8CA71 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Shisa4Q8CA71 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
Shisa4Q8CA71 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shisa4Q8CA71 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Shisa4Q8CA71 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Shisa4Q8CA71 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Shisa4Q8CA71 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Shisa4Q8CA71 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms