Protein–RNA interactions for Protein: Q8C393

Zim1, Zinc finger, imprinted 1, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zim1Q8C393 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zim1Q8C393 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zim1Q8C393 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zim1Q8C393 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Zim1Q8C393 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Zim1Q8C393 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zim1Q8C393 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Zim1Q8C393 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Zim1Q8C393 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Zim1Q8C393 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.33■□□□□ 0.21
Zim1Q8C393 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Zim1Q8C393 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Zim1Q8C393 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.33■□□□□ 0.21
Zim1Q8C393 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zim1Q8C393 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zim1Q8C393 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zim1Q8C393 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zim1Q8C393 Gm9847-201ENSMUST00000052528 599 ntBASIC16.33■□□□□ 0.2
Zim1Q8C393 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Zim1Q8C393 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zim1Q8C393 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zim1Q8C393 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Zim1Q8C393 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Zim1Q8C393 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Zim1Q8C393 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zim1Q8C393 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zim1Q8C393 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Zim1Q8C393 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.32■□□□□ 0.2
Zim1Q8C393 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Zim1Q8C393 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zim1Q8C393 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Zim1Q8C393 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.32■□□□□ 0.2
Zim1Q8C393 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zim1Q8C393 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zim1Q8C393 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zim1Q8C393 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zim1Q8C393 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Zim1Q8C393 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Zim1Q8C393 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Zim1Q8C393 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Zim1Q8C393 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zim1Q8C393 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC16.31■□□□□ 0.2
Zim1Q8C393 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zim1Q8C393 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zim1Q8C393 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zim1Q8C393 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zim1Q8C393 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.31■□□□□ 0.2
Zim1Q8C393 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Zim1Q8C393 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC16.31■□□□□ 0.2
Zim1Q8C393 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zim1Q8C393 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zim1Q8C393 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Zim1Q8C393 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Zim1Q8C393 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Zim1Q8C393 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zim1Q8C393 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.3■□□□□ 0.2
Zim1Q8C393 Gm9870-201ENSMUST00000063874 645 ntBASIC16.3■□□□□ 0.2
Zim1Q8C393 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Zim1Q8C393 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Zim1Q8C393 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Zim1Q8C393 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zim1Q8C393 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Zim1Q8C393 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zim1Q8C393 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zim1Q8C393 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zim1Q8C393 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Zim1Q8C393 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zim1Q8C393 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Zim1Q8C393 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Zim1Q8C393 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Zim1Q8C393 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zim1Q8C393 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zim1Q8C393 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zim1Q8C393 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Zim1Q8C393 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.28■□□□□ 0.2
Zim1Q8C393 Gm12922-201ENSMUST00000120626 809 ntBASIC16.28■□□□□ 0.2
Zim1Q8C393 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.28■□□□□ 0.2
Zim1Q8C393 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Zim1Q8C393 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zim1Q8C393 Gm13241-201ENSMUST00000094493 780 ntBASIC16.28■□□□□ 0.2
Zim1Q8C393 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zim1Q8C393 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zim1Q8C393 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Zim1Q8C393 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.28■□□□□ 0.2
Zim1Q8C393 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Zim1Q8C393 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms