Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim35Q8C006 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim35Q8C006 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Trim35Q8C006 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim35Q8C006 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trim35Q8C006 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim35Q8C006 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.72■□□□□ 0.75
Trim35Q8C006 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim35Q8C006 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim35Q8C006 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Gm43530-201ENSMUST00000195920 274 ntBASIC19.71■□□□□ 0.75
Trim35Q8C006 Gm45484-201ENSMUST00000210310 1141 ntBASIC19.71■□□□□ 0.75
Trim35Q8C006 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim35Q8C006 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim35Q8C006 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim35Q8C006 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim35Q8C006 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim35Q8C006 Gm25318-201ENSMUST00000122554 314 ntBASIC19.7■□□□□ 0.74
Trim35Q8C006 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim35Q8C006 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.7■□□□□ 0.74
Trim35Q8C006 Gm29107-201ENSMUST00000190910 347 ntBASIC19.7■□□□□ 0.74
Trim35Q8C006 Gm37436-201ENSMUST00000193842 1085 ntBASIC19.7■□□□□ 0.74
Trim35Q8C006 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim35Q8C006 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim35Q8C006 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.7■□□□□ 0.74
Trim35Q8C006 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Trim35Q8C006 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trim35Q8C006 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim35Q8C006 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim35Q8C006 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trim35Q8C006 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim35Q8C006 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim35Q8C006 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim35Q8C006 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim35Q8C006 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim35Q8C006 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim35Q8C006 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim35Q8C006 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim35Q8C006 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim35Q8C006 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim35Q8C006 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim35Q8C006 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim35Q8C006 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim35Q8C006 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim35Q8C006 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim35Q8C006 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim35Q8C006 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim35Q8C006 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim35Q8C006 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.68■□□□□ 0.74
Trim35Q8C006 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.68■□□□□ 0.74
Trim35Q8C006 Gm45417-201ENSMUST00000209533 758 ntBASIC19.68■□□□□ 0.74
Trim35Q8C006 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim35Q8C006 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim35Q8C006 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim35Q8C006 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim35Q8C006 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim35Q8C006 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim35Q8C006 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trim35Q8C006 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim35Q8C006 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim35Q8C006 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim35Q8C006 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim35Q8C006 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Trim35Q8C006 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim35Q8C006 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim35Q8C006 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim35Q8C006 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Trim35Q8C006 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim35Q8C006 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim35Q8C006 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim35Q8C006 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim35Q8C006 Gm6991-201ENSMUST00000218475 1178 ntBASIC19.66■□□□□ 0.74
Trim35Q8C006 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim35Q8C006 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim35Q8C006 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Trim35Q8C006 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim35Q8C006 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim35Q8C006 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim35Q8C006 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim35Q8C006 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim35Q8C006 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim35Q8C006 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Trim35Q8C006 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim35Q8C006 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.65■□□□□ 0.74
Trim35Q8C006 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim35Q8C006 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.65■□□□□ 0.74
Trim35Q8C006 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.65■□□□□ 0.74
Trim35Q8C006 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim35Q8C006 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms