Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a2Q8BY89 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a2Q8BY89 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a2Q8BY89 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a2Q8BY89 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a2Q8BY89 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc44a2Q8BY89 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc44a2Q8BY89 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a2Q8BY89 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc44a2Q8BY89 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a2Q8BY89 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a2Q8BY89 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a2Q8BY89 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Slc44a2Q8BY89 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a2Q8BY89 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a2Q8BY89 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc44a2Q8BY89 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a2Q8BY89 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a2Q8BY89 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a2Q8BY89 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a2Q8BY89 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a2Q8BY89 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a2Q8BY89 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a2Q8BY89 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a2Q8BY89 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a2Q8BY89 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc44a2Q8BY89 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc44a2Q8BY89 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc44a2Q8BY89 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.83■□□□□ 0.6
Slc44a2Q8BY89 Rps24-207ENSMUST00000224568 714 ntBASIC18.83■□□□□ 0.6
Slc44a2Q8BY89 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Slc44a2Q8BY89 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc44a2Q8BY89 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Slc44a2Q8BY89 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc44a2Q8BY89 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc44a2Q8BY89 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Slc44a2Q8BY89 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc44a2Q8BY89 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc44a2Q8BY89 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc44a2Q8BY89 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc44a2Q8BY89 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc44a2Q8BY89 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Slc44a2Q8BY89 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc44a2Q8BY89 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc44a2Q8BY89 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Slc44a2Q8BY89 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc44a2Q8BY89 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc44a2Q8BY89 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.81■□□□□ 0.6
Slc44a2Q8BY89 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc44a2Q8BY89 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Slc44a2Q8BY89 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.81■□□□□ 0.6
Slc44a2Q8BY89 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.81■□□□□ 0.6
Slc44a2Q8BY89 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Slc44a2Q8BY89 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 Gm14117-201ENSMUST00000122417 843 ntBASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 Gm45102-201ENSMUST00000207427 857 ntBASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc44a2Q8BY89 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc44a2Q8BY89 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc44a2Q8BY89 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slc44a2Q8BY89 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc44a2Q8BY89 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Slc44a2Q8BY89 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Slc44a2Q8BY89 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Slc44a2Q8BY89 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Slc44a2Q8BY89 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc44a2Q8BY89 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Slc44a2Q8BY89 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Slc44a2Q8BY89 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc44a2Q8BY89 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Slc44a2Q8BY89 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc44a2Q8BY89 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.77■□□□□ 0.6
Slc44a2Q8BY89 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Slc44a2Q8BY89 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc44a2Q8BY89 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Slc44a2Q8BY89 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Slc44a2Q8BY89 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc44a2Q8BY89 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc44a2Q8BY89 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Slc44a2Q8BY89 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Slc44a2Q8BY89 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms